RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TMEM145Q8NBT3 493 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 TTC17Q96AE7 1141 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 MIB2Q96AX9 1013 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 KREMEN1Q96MU8 473 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 CALN1Q9BXU9 219 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 VPS16Q9H269 839 aa14.46□□□□□ -0.09
ATG9A-220ENST00000475339 LRRK1Q38SD2 2015 aa14.46□□□□□ -0.1
ATG9A-220ENST00000475339 SETD2Q9BYW2 2564 aaPredicted RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 TARSL2A2RTX5 802 aaKnown RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 SMTNL1A8MU46 457 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 BECN2A8MW95 431 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 SLC31A1O15431 190 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 AGFG2O95081 481 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 PRLRP16471 622 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 BRD2P25440 801 aaKnown RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 ELAVL4P26378 380 aaKnown RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 POLE2P56282 527 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 BST2Q10589 180 aaKnown RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 ARID5BQ14865 1188 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 STILQ15468 1287 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 TRIP4Q15650 581 aaPredicted RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 GJB7Q6PEY0 223 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 BORAQ6PGQ7 559 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 RSRC2Q7L4I2 434 aaKnown RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 TRIM69Q86WT6 500 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 OR13H1Q8NG92 308 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 PLD4Q96BZ4 506 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 NOX5Q96PH1 765 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 ZNF71Q9NQZ8 489 aaPredicted RBP14.45□□□□□ -0.1
ATG9A-220ENST00000475339 DNAJC28Q9NX36 388 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 SEPT10Q9P0V9 454 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 USP3Q9Y6I4 520 aa14.45□□□□□ -0.1
ATG9A-220ENST00000475339 SPENQ96T58 3664 aaKnown RBP14.44□□□□□ -0.1
ATG9A-220ENST00000475339 EDDM13A0A1B0GTR0 161 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 A1L4Q6 167 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 M0QYV0 167 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 O00370 1275 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 MUSKO15146 869 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 MED7O43513 233 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 SETSIPP0DME0 302 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 MZF1P28698 734 aaPredicted RBP14.44□□□□□ -0.1
ATG9A-220ENST00000475339 TNFRSF8P28908 595 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 CTSOP43234 321 aaPredicted RBP14.44□□□□□ -0.1
ATG9A-220ENST00000475339 ZNF165P49910 485 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 ZNF445P59923 1031 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 APBA1Q02410 837 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 RAPGEF1Q13905 1077 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 SPIDRQ14159 915 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 ADGRF1Q5T601 910 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 RAB11FIP2Q7L804 512 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 B3GNT8Q7Z7M8 397 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 DSG4Q86SJ6 1040 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 PIGZQ86VD9 579 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 ATCAYQ86WG3 371 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 SLC22A18ASQ8N1D0 253 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 KLK6Q92876 244 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 LMLNQ96KR4 655 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
ATG9A-220ENST00000475339 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 KDM4CQ9H3R0 1056 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 SYNDIG1Q9H7V2 258 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 LRRC4Q9HBW1 653 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 EPB41L5Q9HCM4 733 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 FZD3Q9NPG1 666 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 SLCO3A1Q9UIG8 710 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 DNAJC12Q9UKB3 198 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 INTS6Q9UL03 887 aaKnown RBP14.44□□□□□ -0.1
ATG9A-220ENST00000475339 ZFHX3Q15911 3703 aa14.44□□□□□ -0.1
ATG9A-220ENST00000475339 CELSR2Q9HCU4 2923 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 MED13Q9UHV7 2174 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 RNF225M0QZC1 329 aaPredicted RBP14.43□□□□□ -0.1
ATG9A-220ENST00000475339 XPO1O14980 1071 aaKnown RBP14.43□□□□□ -0.1
ATG9A-220ENST00000475339 MTSS1O43312 755 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 PLRG1O43660 514 aaKnown RBP14.43□□□□□ -0.1
ATG9A-220ENST00000475339 TBL1XO60907 577 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 ASLP04424 464 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 COL8A1P27658 744 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 GNA15P30679 374 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 COPB1P53618 953 aaKnown RBP14.43□□□□□ -0.1
ATG9A-220ENST00000475339 TPM4P67936 248 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 LCLAT1Q6UWP7 414 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 ZFAND4Q86XD8 727 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 SIX6OS1Q8N1H7 587 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 ZNF548Q8NEK5 533 aaPredicted RBP14.43□□□□□ -0.1
ATG9A-220ENST00000475339 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 TFAP2BQ92481 460 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 PTPRN2Q92932 1015 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 FAM131CQ96AQ9 280 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 UBXN6Q9BZV1 441 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 NCKIPSDQ9NZQ3 722 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 PISDQ9UG56 409 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 STOML2Q9UJZ1 356 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 ERVW-1Q9UQF0 538 aa14.43□□□□□ -0.1
ATG9A-220ENST00000475339 F8P00451 2351 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 LGALS16A8MUM7 142 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 NVLO15381 856 aaKnown RBP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 THAP12O43422 761 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 RNGTTO60942 597 aaKnown RBP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 RNF224P0DH78 156 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms