RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 C12orf76Q8N812 135 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 EPS8L3Q8TE67 593 aaKnown RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 ING5Q8WYH8 240 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 CFAP36Q96G28 342 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 OXNAD1Q96HP4 312 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 ATP6V1G3Q96LB4 118 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 SPON2Q9BUD6 331 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 ACE2Q9BYF1 805 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 PPCSQ9HAB8 311 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 KIF9Q9HAQ2 790 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 UBA2Q9UBT2 640 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 ZC3H7BQ9UGR2 993 aaKnown RBP13.98□□□□□ -0.17
TRAF4-210ENST00000475329 MAD1L1Q9Y6D9 718 aa13.98□□□□□ -0.17
TRAF4-210ENST00000475329 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 TLDC2A0PJX2 215 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 SDR42E2A6NKP2 422 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 PRAMEF12O95522 483 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 SSTR1P30872 391 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 ITKQ08881 620 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 MPP3Q13368 585 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 RFTN1Q14699 578 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 RARS2Q5T160 578 aaKnown RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 C3orf62Q6ZUJ4 267 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 IGDCC3Q8IVU1 814 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 AGGF1Q8N302 714 aaeCLIP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 SPATA22Q8NHS9 363 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 PGM2Q96G03 612 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 EBNA1BP2Q99848 306 aaKnown RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 TBL1YQ9BQ87 522 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 CASS4Q9NQ75 786 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 VPS18Q9P253 973 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 TBC1D14Q9P2M4 693 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 SEPT3Q9UH03 358 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-210ENST00000475329 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
TRAF4-210ENST00000475329 RFXAPO00287 272 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 POLR3GO15318 223 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 RGS16O15492 202 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 USP12O75317 370 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 MGAT1P26572 445 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 STX2P32856 288 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 KLHL38Q2WGJ6 581 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 RNF43Q68DV7 783 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 LEKR1Q6ZMV7 388 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 CCNJLQ8IV13 435 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 ARID3BQ8IVW6 561 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 MPP5Q8N3R9 675 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 DNAAF3Q8N9W5 541 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 IPMKQ8NFU5 416 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 ITFG1Q8TB96 612 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 BHMTQ93088 406 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 ZSWIM3Q96MP5 696 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 NAT9Q9BTE0 207 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 FICDQ9BVA6 458 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 CINPQ9BW66 212 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 POLR1EQ9GZS1 481 aaKnown RBP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 ACSS3Q9H6R3 686 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 UBP1Q9NZI7 540 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAF4-210ENST00000475329 VPS28Q9UK41 221 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
TRAF4-210ENST00000475329 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 A0A1W2PPC1 479 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 CBX4O00257 560 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 SLC9A3R1O14745 358 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-210ENST00000475329 RRP9O43818 475 aaKnown RBP13.95□□□□□ -0.18
TRAF4-210ENST00000475329 MT-CYBP00156 380 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-210ENST00000475329 PGAM1P18669 254 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 FSHRP23945 695 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 MZF1P28698 734 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-210ENST00000475329 WEE1P30291 646 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 CSKP41240 450 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 NPY2RP49146 381 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 MAXP61244 160 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 DSC2Q02487 901 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 CDH17Q12864 832 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 OLIG2Q13516 323 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 FSCBQ5H9T9 825 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 STEAP4Q687X5 459 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 CASC4Q6P4E1 433 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
TRAF4-210ENST00000475329 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms