RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 PCDH20Q8N6Y1 951 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 NPWQ8N729 165 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 NETO2Q8NC67 525 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 CHST14Q8NCH0 376 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 ISG20Q96AZ6 181 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 ZNF419Q96HQ0 510 aaPredicted RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 CCDC114Q96M63 670 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 GPR174Q9BXC1 333 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 FBXL12Q9NXK8 326 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 RCOR3Q9P2K3 495 aaPredicted RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 SERGEFQ9UGK8 458 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 PPM1HQ9ULR3 514 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 MFHAS1Q9Y4C4 1052 aa16.54■□□□□ 0.24
SRM-204ENST00000475189 FARP1Q9Y4F1 1045 aaPredicted RBP16.54■□□□□ 0.24
SRM-204ENST00000475189 A0A0A6YYK5 440 aaPredicted RBP16.53■□□□□ 0.24
SRM-204ENST00000475189 A0A1W2PP55 124 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 RCCD1A6NED2 376 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 ARHGAP42A6NI28 874 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 BUB1O43683 1085 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 CTSLP07711 333 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 KRT7P08729 469 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 C5AR1P21730 350 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 CHRNA3P32297 505 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 ACSL1P33121 698 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 MPLP40238 635 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 NOP2P46087 812 aaKnown RBP16.53■□□□□ 0.24
SRM-204ENST00000475189 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
SRM-204ENST00000475189 METAP1P53582 386 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 ZNF33AQ06730 810 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 MMRN1Q13201 1228 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 DPYSL3Q14195 570 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 CCDC6Q16204 474 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 CARD16Q5EG05 197 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 PLA2G2CQ5R387 149 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 DPY19L3Q6ZPD9 716 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 CYP2U1Q7Z449 544 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 DSG4Q86SJ6 1040 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 TP53INP2Q8IXH6 220 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 LZTR1Q8N653 840 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 KCTD6Q8NC69 237 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 ACRBPQ8NEB7 543 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 PIP4K2CQ8TBX8 421 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 GANCQ8TET4 914 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 BTBD1Q9H0C5 482 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 NEUROG2Q9H2A3 272 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 NCKAP1Q9Y2A7 1128 aa16.53■□□□□ 0.24
SRM-204ENST00000475189 DOCK9Q9BZ29 2069 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 GOLGA6L6A8MZA4 724 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 J3KR12 359 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 PRAMEF11O60813 436 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 RNASEH2AO75792 299 aaKnown RBP16.52■□□□□ 0.24
SRM-204ENST00000475189 IPO7O95373 1038 aaKnown RBP16.52■□□□□ 0.24
SRM-204ENST00000475189 ITPKAP23677 461 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 DRD3P35462 400 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 SLC1A1P43005 524 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 RECQLP46063 649 aaPredicted RBP16.52■□□□□ 0.24
SRM-204ENST00000475189 DNA2P51530 1060 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 SFSWAPQ12872 951 aaKnown RBP16.52■□□□□ 0.24
SRM-204ENST00000475189 PDK2Q15119 407 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 INO80DQ53TQ3 878 aaPredicted RBP16.52■□□□□ 0.24
SRM-204ENST00000475189 FAM46CQ5VWP2 391 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 PLPP6Q8IY26 295 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 HDDC3Q8N4P3 179 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 TMIEQ8NEW7 156 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 CADM4Q8NFZ8 388 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 CASKIN2Q8WXE0 1202 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 PIGKQ92643 395 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 HSPA12BQ96MM6 686 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 OMDQ99983 421 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 TM6SF2Q9BZW4 377 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 PDFQ9HBH1 243 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 SGK2Q9HBY8 427 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 SEMA4GQ9NTN9 838 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 KLHL11Q9NVR0 708 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 SALL4Q9UJQ4 1053 aa16.52■□□□□ 0.24
SRM-204ENST00000475189 C1QTNF3-AMACRE9PGA6 284 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 RNF103O00237 685 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 DFFAO00273 331 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 PLK4O00444 970 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 BUB1BO60566 1050 aaPredicted RBP16.51■□□□□ 0.23
SRM-204ENST00000475189 TMCC1O94876 653 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 SEMA4FO95754 770 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 ZNF806P0C7X5 589 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 COMTP21964 271 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 KDELR1P24390 212 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 CCNHP51946 323 aaPredicted RBP16.51■□□□□ 0.23
SRM-204ENST00000475189 GSDMDP57764 484 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 CYTH1Q15438 398 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 CSRP2Q16527 193 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 LRRC38Q5VT99 294 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 ARHGAP36Q6ZRI8 547 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 KIAA2013Q8IYS2 634 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
SRM-204ENST00000475189 PCDH19Q8TAB3 1148 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
SRM-204ENST00000475189 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms