RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 EFR3BQ9Y2G0 817 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 CAPN6Q9Y6Q1 641 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 R4GN57 208 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 NYNRINQ9P2P1 1898 aaKnown RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 J3KR12 359 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 RPP40O75818 363 aaKnown RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 ZRANB2O95218 330 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 GSRP00390 522 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 MARCKSL1P49006 195 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 COPS2P61201 443 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 RFTN1Q14699 578 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 PPP2R5EQ16537 467 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 TMCO4Q5TGY1 634 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 ZNF776Q68DI1 518 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 MFSD7Q6UXD7 560 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 Q6ZVU0 165 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 USP30Q70CQ3 517 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 TMIEQ8NEW7 156 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 SLC6A17Q9H1V8 727 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 IPO11Q9UI26 975 aaKnown RBP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 PPP2R2CQ9Y2T4 447 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCAF11-206ENST00000474828 ACTL7AQ9Y615 435 aa17.25■□□□□ 0.35
SCAF11-206ENST00000474828 IGHV1OR15-9A0A0B4J2B8 117 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 MACROD2A1Z1Q3 448 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 MIF4GDA9UHW6 222 aaKnown RBP17.24■□□□□ 0.35
SCAF11-206ENST00000474828 ZBTB24O43167 697 aaPredicted RBP17.24■□□□□ 0.35
SCAF11-206ENST00000474828 PALMO75781 387 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 KRT1P04264 644 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 GJC1P36383 396 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 CSNK1DP48730 415 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 NUMBP49757 651 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 TPMTP51580 245 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 ZNF33AQ06730 810 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 SLC10A2Q12908 348 aaPredicted RBP17.24■□□□□ 0.35
SCAF11-206ENST00000474828 CYTH1Q15438 398 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 CST6Q15828 149 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 STK40Q8N2I9 435 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 HES6Q96HZ4 224 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 LRIG1Q96JA1 1093 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 OLFM3Q96PB7 478 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 TPSD1Q9BZJ3 242 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 PABPC3Q9H361 631 aaKnown RBP17.24■□□□□ 0.35
SCAF11-206ENST00000474828 DTLQ9NZJ0 730 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 MBD1Q9UIS9 605 aaPredicted RBP17.24■□□□□ 0.35
SCAF11-206ENST00000474828 WASF2Q9Y6W5 498 aa17.24■□□□□ 0.35
SCAF11-206ENST00000474828 hCG_1818297A0A087WSY0 165 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 MFSD11O43934 449 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 TMCC1O94876 653 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 ADH1BP00325 375 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 CTSLP07711 333 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 ZFXP17010 805 aaPredicted RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 C5AR1P21730 350 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 OXTRP30559 389 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 GARSP41250 739 aaKnown RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 NSUN2Q08J23 767 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 PLK5Q496M5 336 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 ACCSLQ4AC99 568 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 CARD16Q5EG05 197 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 DPY19L3Q6ZPD9 716 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 ARHGAP36Q6ZRI8 547 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 DSG4Q86SJ6 1040 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 TEX26Q8N6G2 289 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 OR2AP1Q8NGE2 309 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 OR8D1Q8WZ84 308 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 MAML1Q92585 1016 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 ALG3Q92685 438 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 LOXL4Q96JB6 756 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 CCDC114Q96M63 670 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 PSKH2Q96QS6 385 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 PCED1AQ9H1Q7 454 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 DUSP15Q9H1R2 295 aaPredicted RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 WSB2Q9NYS7 404 aaPredicted RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 LHX3Q9UBR4 397 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 UBA2Q9UBT2 640 aaPredicted RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 SARDHQ9UL12 918 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 FZD4Q9ULV1 537 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 FCF1Q9Y324 198 aaKnown RBP17.23■□□□□ 0.35
SCAF11-206ENST00000474828 WDR87Q6ZQQ6 2873 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 NUP205Q92621 2012 aa17.23■□□□□ 0.35
SCAF11-206ENST00000474828 DDX3YO15523 660 aaKnown RBP17.22■□□□□ 0.35
SCAF11-206ENST00000474828 GFRA3O60609 400 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 RNASEH1O60930 286 aaKnown RBP17.22■□□□□ 0.35
SCAF11-206ENST00000474828 CHRNA3P32297 505 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 DRD3P35462 400 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 GBE1Q04446 702 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 TFDP2Q14188 446 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 PMS2CLQ68D20 193 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 SLC36A4Q6YBV0 504 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 KBTBD6Q86V97 674 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 SPOCK2Q92563 424 aa17.22■□□□□ 0.35
SCAF11-206ENST00000474828 RNF25Q96BH1 459 aaPredicted RBP17.22■□□□□ 0.35
SCAF11-206ENST00000474828 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms