RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 PABPC3Q9H361 631 aaKnown RBP20.65■□□□□ 0.9
EDEM3-206ENST00000474725 DUS2Q9NX74 493 aaKnown RBP20.65■□□□□ 0.9
EDEM3-206ENST00000474725 VPS28Q9UK41 221 aa20.65■□□□□ 0.9
EDEM3-206ENST00000474725 H3BQF6 201 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 SNAP91O60641 907 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 MAXP61244 160 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 CDK16Q00536 496 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 TNK2Q07912 1038 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 LMAN2Q12907 356 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 BBS9Q3SYG4 887 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 HSP90B2PQ58FF3 399 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 CFAP58Q5T655 872 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 MICALL1Q8N3F8 863 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 PGBD5Q8N414 524 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 BPIFB1Q8TDL5 484 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 OSCP1Q8WVF1 389 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 C9orf72Q96LT7 481 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 MYADMQ96S97 322 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 TRPV4Q9HBA0 871 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 MED4Q9NPJ6 270 aa20.64■□□□□ 0.89
EDEM3-206ENST00000474725 KIAA1522Q9P206 1035 aaPredicted RBP20.64■□□□□ 0.89
EDEM3-206ENST00000474725 UBA2Q9UBT2 640 aaPredicted RBP20.64■□□□□ 0.89
EDEM3-206ENST00000474725 HEPACAM2A8MVW5 462 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 E7ESA3 106 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ALOX15BO15296 676 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ZMPSTE24O75844 475 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 AP2A1O95782 977 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 FCARP24071 287 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 CD70P32970 193 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 IFNAR2P48551 515 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ARF5P84085 180 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ITKQ08881 620 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 OLIG2Q13516 323 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 KYNUQ16719 465 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 SPDYCQ5MJ68 293 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 KCTD11Q693B1 232 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 TRIM68Q6AZZ1 485 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 TRMT10CQ7L0Y3 403 aaKnown RBP20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ZBED8Q8IZ13 594 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 IQCKQ8N0W5 287 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 MSLNLQ96KJ4 702 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 RIPOR3Q96MK2 946 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 FRMD8Q9BZ67 464 aaPredicted RBP20.63■□□□□ 0.89
EDEM3-206ENST00000474725 NINJ2Q9NZG7 142 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 REV3LO60673 3130 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 EIF3HO15372 352 aaKnown RBP eCLIP20.63■□□□□ 0.89
EDEM3-206ENST00000474725 RIPK2O43353 540 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 TANGO2Q6ICL3 276 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ANKMY2Q8IV38 441 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 KIAA1958Q8N8K9 716 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ASIC4Q96FT7 647 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 LMLNQ96KR4 655 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 ZIM3Q96PE6 472 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 PHACTR1Q9C0D0 580 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 PLAAQ9Y263 795 aa20.63■□□□□ 0.89
EDEM3-206ENST00000474725 MT-CYBP00156 380 aaPredicted RBP20.62■□□□□ 0.89
EDEM3-206ENST00000474725 TYRP14679 529 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 SARNPP82979 210 aaKnown RBP20.62■□□□□ 0.89
EDEM3-206ENST00000474725 NIPAL4Q0D2K0 466 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 SLC29A2Q14542 456 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 ZNF235Q14590 738 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 COL19A1Q14993 1142 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 EML3Q32P44 896 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 ALS2CLQ60I27 953 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 ASTLQ6HA08 431 aaPredicted RBP20.62■□□□□ 0.89
EDEM3-206ENST00000474725 LINGO4Q6UY18 593 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 ZNF771Q7L3S4 317 aaPredicted RBP20.62■□□□□ 0.89
EDEM3-206ENST00000474725 KLHDC8BQ8IXV7 354 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 WDR83Q9BRX9 315 aaKnown RBP20.62■□□□□ 0.89
EDEM3-206ENST00000474725 SLC25A51Q9H1U9 297 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 OBP2AQ9NY56 170 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 MARK1Q9P0L2 795 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 VPS51Q9UID3 782 aa20.62■□□□□ 0.89
EDEM3-206ENST00000474725 MYOFQ9NZM1 2061 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 TTC24A2A3L6 582 aaPredicted RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 MUSKO15146 869 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 USP12O75317 370 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 SUN1O94901 812 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 TTC4O95801 387 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 CD160O95971 181 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 DSC2Q02487 901 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 DHCR24Q15392 516 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 CYTH1Q15438 398 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 AGGF1Q8N302 714 aaeCLIP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 DCAF4L2Q8NA75 395 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 UHMK1Q8TAS1 419 aaKnown RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 LRCH3Q96II8 777 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ZFYVE19Q96K21 471 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 POMKQ9H5K3 350 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ZFP14Q9HCL3 533 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 XAB2Q9HCS7 855 aaKnown RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ABCB8Q9NUT2 735 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 INTS6Q9UL03 887 aaKnown RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 AAR2Q9Y312 384 aaKnown RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ERI2A8K979 691 aaKnown RBP20.61■□□□□ 0.89
EDEM3-206ENST00000474725 PSMD3O43242 534 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ANXA9O76027 345 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 ACSL3O95573 720 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 HLA-FP30511 346 aa20.61■□□□□ 0.89
EDEM3-206ENST00000474725 GBP2P32456 591 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms