RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CDCP2Q5VXM1 449 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 NEK5Q6P3R8 708 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 TRIM65Q6PJ69 517 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 PCSK4Q6UW60 755 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 C11orf57Q6ZUT1 292 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 ERN2Q76MJ5 926 aaKnown RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 CHST14Q8NCH0 376 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 C1orf131Q8NDD1 294 aaKnown RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 IFI44Q8TCB0 444 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 MAPK15Q8TD08 544 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 PPP1R16AQ96I34 528 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 TIGD1Q96MW7 591 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 PSMB7Q99436 277 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 SRRTQ9BXP5 876 aaKnown RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 TNKS2Q9H2K2 1166 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 IL36AQ9UHA7 158 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 ZFR2Q9UPR6 939 aaKnown RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 TBC1D30Q9Y2I9 924 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 PIEZO2Q9H5I5 2752 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 NEMP2A6NFY4 417 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 BECN2A8MW95 431 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 PPP1R3GB7ZBB8 358 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 KLK10O43240 276 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 SMAD6O43541 496 aaKnown RBP14.31□□□□□ -0.12
CCDC78-209ENST00000474647 ERBB2P04626 1255 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 GIMD1P0DJR0 217 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 SULT1E1P49888 294 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 DUSP3P51452 185 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-209ENST00000474647 UCNP55089 124 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 APBA1Q02410 837 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 PAK1Q13153 545 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 MTA1Q13330 715 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 ALFQ53S48 1182 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 C22orf39Q6P5X5 142 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 Q6ZSR6 202 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 ENOSF1Q7L5Y1 443 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 WDTC1Q8N5D0 677 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 TMIEQ8NEW7 156 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC78-209ENST00000474647 TKTL2Q9H0I9 626 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 POLR1BQ9H9Y6 1135 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 PIGVQ9NUD9 493 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 MYO18BQ8IUG5 2567 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 BOD1L1Q8NFC6 3051 aa14.31□□□□□ -0.12
CCDC78-209ENST00000474647 A0A0D9SEW6 157 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 FAM170AA1A519 330 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 H3BM21 787 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 K7ESM1 405 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 LEFTY1O75610 366 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 GP1BAP07359 652 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 BMP6P22004 513 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 NOS2P35228 1153 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 DNA2P51530 1060 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 MARSP56192 900 aaKnown RBP14.3□□□□□ -0.12
CCDC78-209ENST00000474647 RNASE9P60153 205 aaKnown RBP14.3□□□□□ -0.12
CCDC78-209ENST00000474647 HNRNPKP61978 463 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC78-209ENST00000474647 CDKN3Q16667 212 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 DCAF4L2Q8NA75 395 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 ZNF548Q8NEK5 533 aaPredicted RBP14.3□□□□□ -0.12
CCDC78-209ENST00000474647 COL26A1Q96A83 441 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 HIC2Q96JB3 615 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 DUSP23Q9BVJ7 150 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 WDCPQ9H6R7 721 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 PLCB1Q9NQ66 1216 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 MPP6Q9NZW5 540 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 SATB2Q9UPW6 733 aa14.3□□□□□ -0.12
CCDC78-209ENST00000474647 LY6G6EA0A0G2JKS1 128 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 CPED1A4D0V7 1026 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 POM121BA6NF01 834 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 J3QKU1 62 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SCAMP1O15126 338 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 TFE3P19532 575 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SLC9A1P19634 815 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 OR1E1P30953 314 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 LSSP48449 732 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 CLCN6P51797 869 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 NEK3P51956 506 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 ERVPABLB-1P60509 514 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SLC6A3Q01959 620 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 RHDQ02161 417 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 OTUD1Q5VV17 481 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-209ENST00000474647 KIAA1161Q6NSJ0 714 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
CCDC78-209ENST00000474647 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 LRRC31Q6UY01 552 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 DPY19L3Q6ZPD9 716 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 CLEC17AQ6ZS10 378 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SLC26A9Q7LBE3 791 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 PARGQ86W56 976 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 OR7D4Q8NG98 312 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms