RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MNX1P50219 401 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 CERCAMQ5T4B2 595 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 RANBP10Q6VN20 620 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 SLC39A11Q8N1S5 342 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 ZNF512Q96ME7 567 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 FCRL3Q96P31 734 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 MAGEH1Q9H213 219 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 LTBP2Q14767 1821 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 ATP9BO43861 1147 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 ACSL4O60488 711 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 HNRNPCL1O60812 293 aaKnown RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 SIN3BO75182 1162 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 PAPSS2O95340 614 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 ERVK-10P10266 1014 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 SERINC3Q13530 473 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 RAP1GAP2Q684P5 730 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 STRA8Q7Z7C7 330 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 MICALL1Q8N3F8 863 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 ZNF784Q8NCA9 323 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 GPR152Q8TDT2 470 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 USP33Q8TEY7 942 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 SREK1Q8WXA9 508 aaKnown RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 PEX13Q92968 403 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 HMCESQ96FZ2 354 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 TRIM56Q9BRZ2 755 aaKnown RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 SLC13A1Q9BZW2 595 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 NACA2Q9H009 215 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 C20orf96Q9NUD7 363 aaPredicted RBP22.11■■□□□ 1.13
CCM2-206ENST00000474617 NDFIP2Q9NV92 336 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 SSX2IPQ9Y2D8 614 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 TCAF1Q9Y4C2 921 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 CENPFP49454 3210 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 HEATR9A2RTY3 570 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 ZNF840PA6NDX5 716 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 SOAT2O75908 522 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 TBX18O95935 607 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 ALDOAP04075 364 aaKnown RBP22.1■■□□□ 1.13
CCM2-206ENST00000474617 APOA4P06727 396 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 BPGMP07738 259 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 TYK2P29597 1187 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 ETFBP38117 255 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 CDH4P55283 916 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 PLD1Q13393 1074 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 RAB33AQ14088 237 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 KIAA0930Q6ICG6 404 aaPredicted RBP22.1■■□□□ 1.13
CCM2-206ENST00000474617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.1■■□□□ 1.13
CCM2-206ENST00000474617 KIAA0408Q6ZU52 694 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 NUDCD3Q8IVD9 361 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 LMNTD2Q8IXW0 634 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 IPMKQ8NFU5 416 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 GIPC2Q8TF65 315 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 E2F7Q96AV8 911 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 LRRC37BQ96QE4 947 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 FAM167BQ9BTA0 163 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 TUBB6Q9BUF5 446 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 FICDQ9BVA6 458 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 ATP13A1Q9HD20 1204 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 SLCO1B3Q9NPD5 702 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 TXLNGQ9NUQ3 528 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 SPG21Q9NZD8 308 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 ANKRD6Q9Y2G4 727 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 MTO1Q9Y2Z2 717 aaKnown RBP22.1■■□□□ 1.13
CCM2-206ENST00000474617 CAPN7Q9Y6W3 813 aa22.1■■□□□ 1.13
CCM2-206ENST00000474617 TPP1O14773 563 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 BAIAP3O94812 1187 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 EPOP01588 193 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 CES1P23141 567 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 OR1E1P30953 314 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 BNIP1Q12981 228 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 RFTN1Q14699 578 aaPredicted RBP22.09■■□□□ 1.13
CCM2-206ENST00000474617 ALFQ53S48 1182 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 SPOUT1Q5T280 376 aaKnown RBP22.09■■□□□ 1.13
CCM2-206ENST00000474617 DENND5AQ6IQ26 1287 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 CHST9Q7L1S5 443 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 DDX53Q86TM3 631 aaKnown RBP22.09■■□□□ 1.13
CCM2-206ENST00000474617 CALML6Q8TD86 181 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 C10orf82Q8WW14 230 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 SPOCK2Q92563 424 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 CLSTN3Q9BQT9 956 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 MCMBPQ9BTE3 642 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 RHOJQ9H4E5 214 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 FAM96AQ9H5X1 160 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 CCSER2Q9H7U1 834 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 CHRAC1Q9NRG0 131 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 ABCF3Q9NUQ8 709 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 PIH1D1Q9NWS0 290 aaKnown RBP22.09■■□□□ 1.13
CCM2-206ENST00000474617 HCSTQ9UBK5 93 aa22.09■■□□□ 1.13
CCM2-206ENST00000474617 NYNRINQ9P2P1 1898 aaKnown RBP22.08■■□□□ 1.13
CCM2-206ENST00000474617 PRAMEF11O60813 436 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 CLDN11O75508 207 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 UPP2O95045 317 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 URODP06132 367 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 GRK2P25098 689 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 PDE1CQ14123 709 aaPredicted RBP22.08■■□□□ 1.13
CCM2-206ENST00000474617 TAF12Q16514 161 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 FAM182AQ5T1J6 154 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 KDELC1Q6UW63 502 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 CDHR3Q6ZTQ4 885 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 TFAP2DQ7Z6R9 452 aa22.08■■□□□ 1.13
CCM2-206ENST00000474617 GALNT7Q86SF2 657 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms