RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FEM1AQ9BSK4 669 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 PHF7Q9BWX1 381 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 CIPCQ9C0C6 399 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 NOL6Q9H6R4 1146 aaKnown RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 ECT2Q9H8V3 914 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 LRRC40Q9H9A6 602 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 GLOD4Q9HC38 313 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 XAB2Q9HCS7 855 aaKnown RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 SCUBE2Q9NQ36 999 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 IGSF9Q9P2J2 1179 aa10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-202ENST00000474048 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 CACNG3O60359 315 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 IGSF6O95976 241 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 SERPINF2P08697 491 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ARSAP15289 507 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 TPSB2P20231 275 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 FCARP24071 287 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 MZF1P28698 734 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 MAPK8P45983 427 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 NUMBP49757 651 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 KDSRQ06136 332 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 RAD51Q06609 339 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 FCHO2Q0JRZ9 810 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 WASHC5Q12768 1159 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 SEMA5AQ13591 1074 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 TPSAB1Q15661 275 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ACCSLQ4AC99 568 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 CFAP58Q5T655 872 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 HIBCHQ6NVY1 386 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 RHBDF2Q6PJF5 856 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 POTEHQ6S545 545 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 LEKR1Q6ZMV7 388 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 GSPT2Q8IYD1 628 aaKnown RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 RYBPQ8N488 228 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 GLIS1Q8NBF1 620 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 FBXO25Q8TCJ0 367 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 SUSD6Q92537 303 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 MAML1Q92585 1016 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ART4Q93070 314 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 IL12RB2Q99665 862 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ACE2Q9BYF1 805 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ETNK1Q9HBU6 452 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 EIF2B3Q9NR50 452 aaKnown RBP10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 SAMD15Q9P1V8 674 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 ZNF212Q9UDV6 495 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 VPS51Q9UID3 782 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 PLA2G4CQ9UP65 541 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 NEU2Q9Y3R4 380 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 CHD9Q3L8U1 2897 aa10.45□□□□□ -0.74
PRPF38A-202ENST00000474048 CXorf51AA0A1B0GTR3 108 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 GFRA2O00451 464 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 TMCC1O94876 653 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 CPP00450 1065 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 APODP05090 189 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 HLA-DQB2P05538 268 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 CD70P32970 193 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 SERPINH1P50454 418 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 SNRPD1P62314 119 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 ECT2LQ008S8 904 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 SLC10A7Q0GE19 358 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 GPS2Q13227 327 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 MPP3Q13368 585 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 EIF4HQ15056 248 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 PCSK7Q16549 785 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 AAK1Q2M2I8 961 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 INO80DQ53TQ3 878 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 FSCBQ5H9T9 825 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 SYCP2LQ5T4T6 812 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 RNASEH2BQ5TBB1 312 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 MBLAC2Q68D91 279 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 PTCRAQ6ISU1 281 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 CASC4Q6P4E1 433 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 LINGO4Q6UY18 593 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 APCDD1Q8J025 514 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 ZCCHC9Q8N567 271 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 ST13P5Q8NFI4 369 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 IPMKQ8NFU5 416 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 RIN3Q8TB24 985 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 HNRNPLLQ8WVV9 542 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 UBLCP1Q8WVY7 318 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 CPT1BQ92523 772 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 FGF14Q92915 247 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 RSPRY1Q96DX4 576 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 GDAP1L1Q96MZ0 367 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 FCRL5Q96RD9 977 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 SLC25A51Q9H1U9 297 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 GRHL1Q9NZI5 618 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 FAM153AQ9UHL3 310 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 ATP8A1Q9Y2Q0 1164 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 CHD7Q9P2D1 2997 aa10.44□□□□□ -0.74
PRPF38A-202ENST00000474048 DOCK8Q8NF50 2099 aa10.43□□□□□ -0.74
PRPF38A-202ENST00000474048 MIA3Q5JRA6 1907 aa10.43□□□□□ -0.74
PRPF38A-202ENST00000474048 KIF26AQ9ULI4 1882 aaPredicted RBP10.43□□□□□ -0.74
PRPF38A-202ENST00000474048 TRANK1O15050 2925 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms