RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MARC1Q5VT66 337 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 TTC39BQ5VTQ0 682 aaPredicted RBP18.31■□□□□ 0.52
VARS2-206ENST00000473916 PLPP4Q5VZY2 271 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 RASSF3Q86WH2 238 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 BANPQ8N9N5 519 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 CKAP2Q8WWK9 683 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 ATP2A3Q93084 1043 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 ZNF180Q9UJW8 692 aa18.31■□□□□ 0.52
VARS2-206ENST00000473916 AAR2Q9Y312 384 aaKnown RBP18.31■□□□□ 0.52
VARS2-206ENST00000473916 TCP11X1B4DZS4 312 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 MUSKO15146 869 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 TLL1O43897 1013 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 ANXA9O76027 345 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 ASMTLO95671 621 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 POLBP06746 335 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 MMP2P08253 660 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 NMBRP28336 390 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 GABRR2P28476 465 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 CTNNB1P35222 781 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 CD86P42081 329 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 RENBPP51606 427 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 CDH17Q12864 832 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 POU6F1Q14863 301 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 PARP15Q460N3 678 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 ANKRD20A4Q4UJ75 823 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 LILRA6Q6PI73 481 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 SLC22A17Q8WUG5 538 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 SPOCK2Q92563 424 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 TTC17Q96AE7 1141 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 SMG5Q9UPR3 1016 aaKnown RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 C8AP07357 584 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 MYOGP15173 224 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 HOXD9P28356 352 aaPredicted RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 KDELC1Q6UW63 502 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 MARK2Q7KZI7 788 aaKnown RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 TMEM135Q86UB9 458 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 TMC8Q8IU68 726 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 TCP10LQ8TDR4 215 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 CERS2Q96G23 380 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 NAT9Q9BTE0 207 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 UXTQ9UBK9 157 aaPredicted RBP18.3■□□□□ 0.52
VARS2-206ENST00000473916 SLC4A7Q9Y6M7 1214 aa18.3■□□□□ 0.52
VARS2-206ENST00000473916 GOLGA8TH3BQL2 631 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 GREM1O60565 184 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 PRAMEF11O60813 436 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 ADRA1DP25100 572 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 GEMP55040 296 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 WNT3AP56704 352 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 GNA12Q03113 381 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 ZKSCAN8Q15776 578 aaPredicted RBP18.29■□□□□ 0.52
VARS2-206ENST00000473916 ADGRF1Q5T601 910 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 CDHR3Q6ZTQ4 885 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 CYS1Q717R9 158 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 CCNJLQ8IV13 435 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 TEX26Q8N6G2 289 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
VARS2-206ENST00000473916 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
VARS2-206ENST00000473916 AGAP2Q99490 1192 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 RAD9AQ99638 391 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 C17orf80Q9BSJ5 609 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 FSD1LQ9BXM9 530 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 LRRC3Q9BY71 257 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 PDFQ9HBH1 243 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 CPQQ9Y646 472 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 GBF1Q92538 1859 aa18.29■□□□□ 0.52
VARS2-206ENST00000473916 CARNS1A5YM72 827 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 RFPL1O75677 317 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 TOP3BO95985 862 aaKnown RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 SNRPAP09012 282 aaKnown RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 NPY2RP49146 381 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 IL10RBQ08334 325 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SPANXN3Q5MJ09 141 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 ACBD5Q5T8D3 534 aaPredicted RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 LVRNQ6Q4G3 990 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 PACS1Q6VY07 963 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 CPLX4Q7Z7G2 160 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 LINC00523Q86TU6 105 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 ITIH5Q86UX2 942 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SLC25A41Q8N5S1 370 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 MAB21L3Q8N8X9 362 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.28■□□□□ 0.52
VARS2-206ENST00000473916 KREMEN2Q8NCW0 462 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 BHMTQ93088 406 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 AZIN2Q96A70 460 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SGSM3Q96HU1 749 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 IL22Q9GZX6 179 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SLC25A51Q9H1U9 297 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 FGFR1OP2Q9NVK5 253 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 DONSONQ9NYP3 566 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SOX13Q9UN79 622 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 CCL16O15467 120 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 KRT37O76014 449 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 USP1O94782 785 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 HDCP19113 662 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 ABCG1P45844 678 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 PPP3CCP48454 512 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms