RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CDRT15L2A8MXV6 281 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 PMM2O15305 246 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 ARHGAP6O43182 974 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 SLC28A2O43868 658 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 GCATO75600 419 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 GP1BAP07359 652 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 KRT5P13647 590 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 AKT2P31751 481 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 ACADSBP45954 432 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 KRT85P78386 507 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 NFKB2Q00653 900 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 NME3Q13232 169 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 CLN3Q13286 438 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF177Q13360 481 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 PDCLQ13371 301 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 LINC00303Q3SY05 128 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 EFL1Q7Z2Z2 1120 aaKnown RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 PTAR1Q7Z6K3 402 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 LSMEM2Q8N112 164 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 ATP11CQ8NB49 1132 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 STK32AQ8WU08 396 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 MED8Q96G25 268 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 KLF6Q99612 283 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-209ENST00000473421 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 GGT7Q9UJ14 662 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
TRAF4-209ENST00000473421 SPTY2D1-AS1A0A0U1RR47 76 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 SART1O43290 800 aaKnown RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 LEFTY1O75610 366 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 ADCY5O95622 1261 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 CSF2P04141 144 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 CELA2BP08218 269 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 BMP6P22004 513 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 GKP32189 559 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 CCR1P32246 355 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 UCNP55089 124 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 GCNT1Q02742 428 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 KCNC4Q03721 635 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 C1orf61Q13536 156 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 TGIF1Q15583 401 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 RABGAP1LQ5R372 815 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 ERN2Q76MJ5 926 aaKnown RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 OR7D4Q8NG98 312 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 RNF34Q969K3 372 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 TSG101Q99816 390 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 SLC17A9Q9BYT1 436 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 GTPBP4Q9BZE4 634 aaKnown RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 INTS2Q9H0H0 1204 aaKnown RBP12.9□□□□□ -0.34
TRAF4-209ENST00000473421 MUC3BQ9H195 1237 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 THSD1Q9NS62 852 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 ITM2BQ9Y287 266 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 SPTA1P02549 2419 aa12.9□□□□□ -0.34
TRAF4-209ENST00000473421 EME2A4GXA9 379 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 A6NNZ2 444 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 MUSKO15146 869 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 THAP12O43422 761 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 WISP1O95388 367 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 ERBB2P04626 1255 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 NME1P15531 152 aaKnown RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 CDK17Q00537 523 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 TTC39BQ5VTQ0 682 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 TTI2Q6NXR4 508 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 IGF2-ASQ6U949 168 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 FAM183BPQ6ZVS7 135 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 TFAP2DQ7Z6R9 452 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 HSCBQ8IWL3 235 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 LMX1AQ8TE12 382 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 UBE2TQ9NPD8 197 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 PIGVQ9NUD9 493 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-209ENST00000473421 FADS3Q9Y5Q0 445 aa12.89□□□□□ -0.35
TRAF4-209ENST00000473421 IGLON5A6NGN9 336 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 NOBOXO60393 691 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 TNFSF15O95150 251 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 CD160O95971 181 aa12.88□□□□□ -0.35
TRAF4-209ENST00000473421 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
TRAF4-209ENST00000473421 CDH4P55283 916 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms