RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
VPS13D-205ENST00000473099 UBA2Q9UBT2 640 aaPredicted RBP13.06□□□□□ -0.32
VPS13D-205ENST00000473099 FETUBQ9UGM5 382 aa13.06□□□□□ -0.32
VPS13D-205ENST00000473099 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
VPS13D-205ENST00000473099 CHD9Q3L8U1 2897 aa13.06□□□□□ -0.32
VPS13D-205ENST00000473099 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 J3KR12 359 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 CPP00450 1065 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 FSHRP23945 695 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ACVRL1P37023 503 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 NPY2RP49146 381 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 SGSHP51688 502 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ZNF844Q08AG5 666 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 RARS2Q5T160 578 aaKnown RBP13.05□□□□□ -0.32
VPS13D-205ENST00000473099 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 TMC5Q6UXY8 1006 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
VPS13D-205ENST00000473099 DCAF4L2Q8NA75 395 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 FBXO36Q8NEA4 188 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 OR7D4Q8NG98 312 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 FIBINQ8TAL6 211 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 ACDQ96AP0 544 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 C2orf49Q9BVC5 232 aaPredicted RBP13.05□□□□□ -0.32
VPS13D-205ENST00000473099 NT5MQ9NPB1 228 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
VPS13D-205ENST00000473099 A0A0D9SEW6 157 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 MAGEB16A2A368 324 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 RASGRF2O14827 1237 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 ATP5DP30049 168 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 STX2P32856 288 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 ELK3P41970 407 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 PLK1P53350 603 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 GAD2Q05329 585 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 HYAL1Q12794 435 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 CDH17Q12864 832 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 KLHL38Q2WGJ6 581 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 INO80DQ53TQ3 878 aaPredicted RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 TCEAL5Q5H9L2 206 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 AGBL2Q5U5Z8 902 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 FYB2Q5VWT5 728 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 ZNF534Q76KX8 674 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 SIGLEC10Q96LC7 697 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 PSKH2Q96QS6 385 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 EBNA1BP2Q99848 306 aaKnown RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 GORASP1Q9BQQ3 440 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 FEM1AQ9BSK4 669 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 MLPHQ9BV36 600 aaPredicted RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
VPS13D-205ENST00000473099 FSD1LQ9BXM9 530 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 SLC2A11Q9BYW1 496 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 VPS37BQ9H9H4 285 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 TRPV4Q9HBA0 871 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 TMBIM4Q9HC24 238 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 LRRC4CQ9HCJ2 640 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 BFARQ9NZS9 450 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 CHMP2BQ9UQN3 213 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 CCL26Q9Y258 94 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 TTLL3Q9Y4R7 772 aa13.04□□□□□ -0.32
VPS13D-205ENST00000473099 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 UNC80Q8N2C7 3258 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 PRAMEF12O95522 483 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 GLP2RO95838 553 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
VPS13D-205ENST00000473099 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
VPS13D-205ENST00000473099 SLC20A2Q08357 652 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 ITKQ08881 620 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 DMC1Q14565 340 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 RASA2Q15283 850 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 CES5AQ6NT32 575 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 RETSATQ6NUM9 610 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 C3orf62Q6ZUJ4 267 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
VPS13D-205ENST00000473099 DNAAF3Q8N9W5 541 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 ING5Q8WYH8 240 aa13.03□□□□□ -0.32
VPS13D-205ENST00000473099 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms