RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SIGLEC16A6NMB1 481 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 F8VP50 259 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PGRMC1O00264 195 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ATXN7O15265 892 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PSTPIP1O43586 416 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 CEP104O60308 925 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ADAM23O75077 832 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 CBFA2T3O75081 653 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 DAB1O75553 588 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 FBXO21O94952 628 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 KRT1P04264 644 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PLA2G2AP14555 144 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 GPD1P21695 349 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 CYP2F1P24903 491 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 CTNNA2P26232 953 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 RFC1P35251 1148 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 FLT3P36888 993 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 DPP6P42658 865 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SLC1A1P43005 524 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 IFNAR2P48551 515 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ATXN3P54252 364 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 RNASE9P60153 205 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SLC6A3Q01959 620 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 HNRNPDQ14103 355 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 LAPTM4AQ15012 233 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 NFE2Q16621 373 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 DUOXA1Q1HG43 343 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SEL1L2Q5TEA6 688 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 DCAF12L1Q5VU92 463 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SDHAF4Q5VUM1 108 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 TRNP1Q6NT89 227 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 RIPOR1Q6ZS17 1223 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SLC26A9Q7LBE3 791 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 TMEM110Q86TL2 294 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 MARCH9Q86YJ5 346 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ZDHHC17Q8IUH5 632 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 DEFB119Q8N690 84 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ALLCQ8N6M5 410 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 CEP112Q8N8E3 955 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 NIPA2Q8N8Q9 360 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 IL17RCQ8NAC3 791 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 TXNDC5Q8NBS9 432 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ZMIZ2Q8NF64 920 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 EPS8L3Q8TE67 593 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ANKRD7Q92527 254 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 MRPS31Q92665 395 aaKnown RBP6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ALG3Q92685 438 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ATP2A3Q93084 1043 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 FAM149B1Q96BN6 582 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PBKQ96KB5 322 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 HSFY1Q96LI6 401 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 ULBP1Q9BZM6 244 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 KLHL11Q9NVR0 708 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PCDHB5Q9Y5E4 795 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 PCDHGC4Q9Y5F7 938 aa6.59□□□□□ -1.35
HDAC1-205ENST00000472928 TLN1Q9Y490 2541 aaKnown RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 A0A087WV48 116 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CTAGE15A4D2H0 777 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 C2CD4BA6NLJ0 364 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 HHLA1C9JL84 531 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 PDE2AO00408 941 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CES2O00748 559 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 EREGO14944 169 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SART1O43290 800 aaKnown RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 HSF2BPO75031 334 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 ALDH1A2O94788 518 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 KLF8O95600 359 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CTAGE8P0CG41 777 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 TCF4P15884 667 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 DESP17661 470 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SDC4P31431 198 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 PAFAH1B1P43034 410 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 KIR2DL1P43626 348 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SLC6A11P48066 632 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 RPL34P49207 117 aaKnown RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 TKTL1P51854 596 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SLC5A3P53794 718 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 TAS2R40P59535 323 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 ZXDBP98169 803 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 C2orf54Q08AI8 447 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SMARCB1Q12824 385 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SFSWAPQ12872 951 aaKnown RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SLC14A1Q13336 389 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 PIGHQ14442 188 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 TAF5Q15542 800 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CDO1Q16878 200 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 C15orf59Q2T9L4 293 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CFAP221Q4G0U5 840 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 TEX35Q5T0J7 233 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 EMC10Q5UCC4 262 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 CTAGE6Q86UF2 777 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 C12orf40Q86WS4 652 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 SLC41A1Q8IVJ1 513 aa6.58□□□□□ -1.36
HDAC1-205ENST00000472928 NAXDQ8IW45 347 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms