RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 SH2D4BQ5SQS7 431 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 XP32Q5T750 250 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ISM2Q6H9L7 571 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 CENPPQ6IPU0 288 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 IRGCQ6NXR0 463 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 SPATA21Q7Z572 469 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 VASH2Q86V25 355 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 CACUL1Q86Y37 369 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 CCDC13Q8IYE1 715 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 HACE1Q8IYU2 909 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 SRBD1Q8N5C6 995 aaKnown RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 GBP7Q8N8V2 638 aaPredicted RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 TRIM58Q8NG06 486 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PANK1Q8TE04 598 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 TRPC4APQ8TEL6 797 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PIGOQ8TEQ8 1089 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 LZICQ8WZA0 190 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ZNF75CPQ92670 426 aaPredicted RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 EXOC4Q96A65 974 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 TBC1D20Q96BZ9 403 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PRR11Q96HE9 360 aaPredicted RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 MRGPRX1Q96LB2 322 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PPP1R10Q96QC0 940 aaKnown RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 CAPS2Q9BXY5 557 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 TRIM55Q9BYV6 548 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ABCG4Q9H172 646 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 BHMT2Q9H2M3 363 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 MRPL46Q9H2W6 279 aaKnown RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 CAAP1Q9H8G2 361 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 TM9SF3Q9HD45 589 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PRDM7Q9NQW5 492 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ARHGEF4Q9NR80 690 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 MBNL3Q9NUK0 354 aaKnown RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 WSB2Q9NYS7 404 aaPredicted RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ZMYM5Q9UJ78 669 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 PCDHB10Q9UN67 800 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 G3BP2Q9UN86 482 aaKnown RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 GDAQ9Y2T3 454 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 FHOD1Q9Y613 1164 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 V9GYY5 206 aaPredicted RBP4.6□□□□□ -1.67
LMNB1-205ENST00000472034 DCHS2Q6V1P9 2916 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 ESPL1Q14674 2120 aa4.6□□□□□ -1.67
LMNB1-205ENST00000472034 A0A1B0GTQ1 180 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 MTMR11A4FU01 709 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 GOLGA8AA7E2F4 631 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 WASH4PA8MWX3 477 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 WASH3PC4AMC7 463 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 MYO1CO00159 1063 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 ABLIM1O14639 778 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CASQ2O14958 399 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CASC3O15234 703 aaKnown RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 PAPSS1O43252 624 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 TRAPPC3O43617 180 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CEP104O60308 925 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 DNAJC6O75061 913 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 TADA3O75528 432 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RTN3O95197 1032 aaPredicted RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 LARGE1O95461 756 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 APODP05090 189 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 EDN1P05305 212 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 ITGAVP06756 1048 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CALM1P0DP23 149 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CALM2P0DP24 149 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CALM3P0DP25 149 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CDK4P11802 303 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 GCFC2P16383 781 aaKnown RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RRM1P23921 792 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RPL13P26373 211 aaKnown RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CDC25CP30307 473 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 AXLP30530 894 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 DDIT3P35638 169 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 GPR15P49685 360 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 PEX5P50542 639 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 AFF3P51826 1226 aaKnown RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 PTENP60484 403 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RPL10AP62906 217 aaKnown RBP4.59□□□□□ -1.67
LMNB1-205ENST00000472034 TUBA1BP68363 451 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CBX1P83916 185 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CHRNEQ04844 493 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 STK3Q13188 491 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RASA2Q15283 850 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 INAVAQ3KP66 663 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 PRR16Q569H4 304 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 XKR3Q5GH77 459 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 EEF1DP3Q658K8 133 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 FCRLBQ6BAA4 426 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 NXNQ6DKJ4 435 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 SLC27A1Q6PCB7 646 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 POMZP3Q6PJE2 187 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CSPG4Q6UVK1 2322 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 TUBA1AQ71U36 451 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 CBLL1Q75N03 491 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 NIPA1Q7RTP0 329 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 HEATR3Q7Z4Q2 680 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 FERMT3Q86UX7 667 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 FAM124AQ86V42 546 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 MON1AQ86VX9 555 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 RAB11FIP4Q86YS3 637 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 WFDC3Q8IUB2 231 aa4.59□□□□□ -1.67
LMNB1-205ENST00000472034 FAM114A1Q8IWE2 563 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms