RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ATCAYQ86WG3 371 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 DCP2Q8IU60 420 aaKnown RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 TTC39CQ8N584 583 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 ATP6V0D2Q8N8Y2 350 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 CHST14Q8NCH0 376 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 KIAA0895Q8NCT3 520 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FBXL13Q8NEE6 735 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 WDR48Q8TAF3 677 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 BTN2A2Q8WVV5 523 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SCG3Q8WXD2 468 aaKnown RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PPP1R16AQ96I34 528 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FEM1CQ96JP0 617 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 ZMYND15Q9H091 742 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FAM204AQ9H8W3 233 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 DMAC2Q9NW81 257 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 GEMIN8Q9NWZ8 242 aaKnown RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 RAB20Q9NX57 234 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 FOXJ2Q9P0K8 574 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PLEKHB1Q9UF11 243 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-204ENST00000471488 GGT7Q9UJ14 662 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 TLR6Q9Y2C9 796 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
HDAC1-204ENST00000471488 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 IGLON5A6NGN9 336 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 D6RAR5 112 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TMX2-CTNND1H3BSU7 103 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 M0QYT0 321 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ALOX15BO15296 676 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 YY2O15391 372 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SNAP91O60641 907 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CUTAO60888 179 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 LEFTY1O75610 366 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 MT-CO1P00395 513 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PRNPP04156 253 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 VDRP11473 427 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TSHRP16473 764 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SYT1P21579 422 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 BRD2P25440 801 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PSMC2P35998 433 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ETV5P41161 510 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CASRP41180 1078 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CCR10P46092 362 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ME1P48163 572 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 NEK3P51956 506 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 YWHAEP62258 255 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 RPS21P63220 83 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 KRT83P78385 493 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 EIF3IQ13347 325 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CUL2Q13617 745 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PTK2BQ14289 1009 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TPRG1LQ5T0D9 272 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TMEM164Q5U3C3 297 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SHC4Q6S5L8 630 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TMEM270Q6UE05 265 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 KYAT3Q6YP21 454 aaKnown RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 HID1Q8IV36 788 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PHACTR4Q8IZ21 702 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SH2D3CQ8N5H7 860 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 KYQ8NBH2 561 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PCDH19Q8TAB3 1148 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 C9orf43Q8TAL5 461 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 IFT43Q96FT9 208 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 BMFQ96LC9 184 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ZNF396Q96N95 335 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TMEM74Q96NL1 305 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PPP1R9BQ96SB3 815 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SEMA3CQ99985 751 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SPON2Q9BUD6 331 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 LRRC61Q9BV99 259 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 IRX2Q9BZI1 471 aaPredicted RBP7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SIK2Q9H0K1 926 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 KCTD10Q9H3F6 313 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 ZDHHC6Q9H6R6 413 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 MAGEF1Q9HAY2 307 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 TMPRSS4Q9NRS4 437 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 IL36AQ9UHA7 158 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 SERTAD1Q9UHV2 236 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 RABGEF1Q9UJ41 708 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 VANGL2Q9ULK5 521 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 GPR34Q9UPC5 381 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 PCDHGA7Q9Y5G6 932 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 CSNK1G3Q9Y6M4 447 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 AHCTF1Q8WYP5 2266 aa7.03□□□□□ -1.28
HDAC1-204ENST00000471488 MYO9AB2RTY4 2548 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 TCAF2A6NFQ2 919 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 RNF103O00237 685 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 O00370 1275 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 NVLO15381 856 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms