RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TRDMT1O14717 391 aaKnown RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 PSMD3O43242 534 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 BANF1O75531 89 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 HDCP19113 662 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 MDH1P40925 334 aaKnown RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 ATP1A2P50993 1020 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 GEMIN4P57678 1058 aaKnown RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 IFI35P80217 286 aaPredicted RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 PRPSAP1Q14558 356 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 ARTNQ5T4W7 220 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 LRRC8BQ6P9F7 803 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 CCNJLQ8IV13 435 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 ARHGAP12Q8IWW6 846 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 UMODL1-AS1Q8N2C9 162 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 NETO2Q8NC67 525 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 EDAQ92838 391 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 CELF6Q96J87 481 aaKnown RBP17.83■□□□□ 0.44
HSPG2-208ENST00000471322 TEKT5Q96M29 485 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 CYTH2Q99418 400 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 RNF38Q9H0F5 515 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 TMEM248Q9NWD8 314 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 SMPD4Q9NXE4 827 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 RABGEF1Q9UJ41 708 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 VANGL2Q9ULK5 521 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 CHMP2BQ9UQN3 213 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 ACTL7BQ9Y614 415 aa17.83■□□□□ 0.44
HSPG2-208ENST00000471322 TRAV19A0A0A6YYK7 116 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 MATN3O15232 486 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 ECI2O75521 394 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 CPP00450 1065 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 STX2P32856 288 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 HARS2P49590 506 aaKnown RBP17.82■□□□□ 0.44
HSPG2-208ENST00000471322 IER5LQ5T953 404 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 NLRP14Q86W24 1093 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 RIN3Q8TB24 985 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 ARHGEF2Q92974 986 aaKnown RBP17.82■□□□□ 0.44
HSPG2-208ENST00000471322 FATE1Q969F0 183 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 NXPE3Q969Y0 559 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 AZIN2Q96A70 460 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 ZFYVE19Q96K21 471 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 GBA3Q9H227 469 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 ZC3H7BQ9UGR2 993 aaKnown RBP17.82■□□□□ 0.44
HSPG2-208ENST00000471322 RSPH14Q9UHP6 348 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 DUSP12Q9UNI6 340 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 TECTAO75443 2155 aa17.82■□□□□ 0.44
HSPG2-208ENST00000471322 DENND4CQ5VZ89 1909 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 ANAPC1Q9H1A4 1944 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SDR42E2A6NKP2 422 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 AP3B1O00203 1094 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SCAMP3O14828 347 aaKnown RBP17.81■□□□□ 0.44
HSPG2-208ENST00000471322 AVILO75366 819 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 JCHAINP01591 159 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 PSMB4P28070 264 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SSTR1P30872 391 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SLC11A2P49281 568 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 ZXDBP98169 803 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 ANO4Q32M45 955 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SYCP2LQ5T4T6 812 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 PDCD7Q8N8D1 485 aaKnown RBP17.81■□□□□ 0.44
HSPG2-208ENST00000471322 FBF1Q8TES7 1133 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 PLD4Q96BZ4 506 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 EBNA1BP2Q99848 306 aaKnown RBP17.81■□□□□ 0.44
HSPG2-208ENST00000471322 PRMT1Q99873 361 aaKnown RBP17.81■□□□□ 0.44
HSPG2-208ENST00000471322 WDR83Q9BRX9 315 aaKnown RBP17.81■□□□□ 0.44
HSPG2-208ENST00000471322 NAT9Q9BTE0 207 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 SLC39A8Q9C0K1 460 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 TRPV4Q9HBA0 871 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 TDP1Q9NUW8 608 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 MPP6Q9NZW5 540 aa17.81■□□□□ 0.44
HSPG2-208ENST00000471322 MYO16Q9Y6X6 1858 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 ARHGAP42A6NI28 874 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 SRRM3A6NNA2 597 aaPredicted RBP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 POC1B-GALNT4F8VUJ3 575 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 ZBTB24O43167 697 aaPredicted RBP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 COCHO43405 550 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 SUN1O94901 812 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 HMBSP08397 361 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 SRFP11831 508 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CCNB1P14635 433 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 PSMC3P17980 439 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 DDX6P26196 483 aaKnown RBP eCLIP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 GDI1P31150 447 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 IRAK1P51617 712 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 GNGT1P63211 74 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 FBXL22Q6P050 247 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 ZNF534Q76KX8 674 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 EXOC3L1Q86VI1 746 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 IGDCC3Q8IVU1 814 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CENPTQ96BT3 561 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 SIGLEC10Q96LC7 697 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 TRMT61BQ9BVS5 477 aaKnown RBP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 EURLQ9NYK6 297 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 SENP1Q9P0U3 644 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 PSMC3IPQ9P2W1 217 aaPredicted RBP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 FBXL21Q9UKT6 434 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CA14Q9ULX7 337 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 MAFKO60675 156 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 AP2A1O95782 977 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms