RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TMLHEQ9NVH6 421 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CDH22Q9UJ99 828 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 KCND3Q9UK17 655 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 BAG5Q9UL15 447 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 OSGIN2Q9Y236 505 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 PCDHGB1Q9Y5G3 927 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 RAI2Q9Y5P3 530 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 IFITM10A6NMD0 228 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 H0Y3Z8 333 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 HLA-DQA2P01906 255 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CSTBP04080 98 aaKnown RBP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 PRSS2P07478 247 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 MYZAPP0CAP1 466 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 FCGR1AP12314 374 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CYP4B1P13584 511 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CHN1P15882 459 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 GNLYP22749 145 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 ITGB8P26012 769 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 AVPR2P30518 371 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 HTR3AP46098 478 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 PDLIM4P50479 330 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CLCN5P51795 746 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 RPS6KA3P51812 740 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 NUDT6P53370 316 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 PRKAA2P54646 552 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CDH12P55289 794 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 DSC1Q08554 894 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 KIF5AQ12840 1032 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 BLMHQ13867 455 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 DCTN1Q14203 1278 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 HLFQ16534 295 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 LRRC24Q50LG9 513 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TBC1D9BQ66K14 1250 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TANGO2Q6ICL3 276 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 C1orf228Q6PIY5 440 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 RINLQ6ZS11 566 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CREB3L2Q70SY1 520 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 SYT13Q7L8C5 426 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 RASGRP2Q7LDG7 609 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF367Q7RTV3 350 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 SERPINA11Q86U17 422 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TRIM74Q86UV6 250 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TRIM73Q86UV7 250 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 FJX1Q86VR8 437 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 PALB2Q86YC2 1186 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CCDC117Q8IWD4 279 aaPredicted RBP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 BRSK2Q8IWQ3 736 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 MIGA1Q8NAN2 632 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 OR14A16Q8NHC5 309 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 SLC35F5Q8WV83 523 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 POF1BQ8WVV4 589 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF333Q96JL9 665 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TRAPPC9Q96Q05 1148 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 TEFMQ96QE5 360 aaKnown RBP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 CADM1Q9BY67 442 aaKnown RBP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 LHPPQ9H008 270 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF700Q9H0M5 742 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 G6PC2Q9NQR9 355 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 PLSCR4Q9NRQ2 329 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 SEL1LQ9UBV2 794 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 KLQ9UEF7 1012 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 SRPRBQ9Y5M8 271 aaKnown RBP1.55□□□□□ -2.16
UBXN4-207ENST00000471246 MST1RQ04912 1400 aa1.55□□□□□ -2.16
UBXN4-207ENST00000471246 A0A1B0GUV1 79 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PLSCR5A0PG75 271 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 C17orf102A2RUQ5 167 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 LINC01553A4QN01 128 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 DDTLA6NHG4 134 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 HMX3A6NHT5 357 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 SMTNL1A8MU46 457 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 F5H423 210 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 HSPB6O14558 160 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 RNMTO43148 476 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 SOX30O94993 753 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 ZBTB11O95625 1053 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PPP1R3DO95685 299 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 GLUD1P00367 558 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 MMP3P08254 477 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 VEGFAP15692 232 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 YWHAQP27348 245 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 RFC1P35251 1148 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PNPLA4P41247 253 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 AMTP48728 403 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 GLUD2P49448 558 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 MCM2P49736 904 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 COMPP49747 757 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 KRTAP10-8P60410 259 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 RPL36AP83881 106 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 FOXO1Q12778 655 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 THOC5Q13769 683 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 BYSLQ13895 437 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 BRD3Q15059 726 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PLCB4Q15147 1175 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 SMAD1Q15797 465 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TIGD6Q17RP2 521 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 AP5B1Q2VPB7 878 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TDRD12Q587J7 1177 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 RUNDC3AQ59EK9 446 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 AADACL2Q6P093 401 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms