RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TPSG1Q9NRR2 321 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 KLHL11Q9NVR0 708 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 OSER1Q9NX31 292 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CWC15Q9P013 229 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 OR12D3Q9UGF7 316 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SFMBT1Q9UHJ3 866 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 LSM7Q9UK45 103 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 UTP11Q9Y3A2 253 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 HCFC2Q9Y5Z7 792 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 DOCK6Q96HP0 2047 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SHROOM3Q8TF72 1996 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CEP250Q9BV73 2442 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 C2orf16Q68DN1 1984 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CHD5Q8TDI0 1954 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TYW5A2RUC4 315 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 F5H5T6 163 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 DYNC1I1O14576 645 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TM4SF5O14894 197 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CCL16O15467 120 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MTSS1O43312 755 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MSI1O43347 362 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 COCHO43405 550 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 LIASO43766 372 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CREB3O43889 395 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ERLIN1O75477 346 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 OLFM2O95897 454 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 RHOP08100 348 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CD48P09326 243 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MBL2P11226 248 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MYL4P12829 197 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 KRT10P13645 584 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 EPCAMP16422 314 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 GOT1P17174 413 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 HOXB8P17481 243 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 HDCP19113 662 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 EPHB2P29323 1055 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NOS3P29474 1203 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 HOXC13P31276 330 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ACTN2P35609 894 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 COILP38432 576 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NRIP1P48552 1158 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 DRG2P55039 364 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MLLT6P55198 1093 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 EIF3EP60228 445 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 SLC7A9P82251 487 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ZNF33AQ06730 810 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CUL1Q13616 776 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 BYSLQ13895 437 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 DPYSQ14117 519 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PAFAH1B3Q15102 231 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PDK1Q15118 436 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NOMO1Q15155 1222 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 SIX1Q15475 284 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CA9Q16790 459 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ERCC6LQ2NKX8 1250 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MAP9Q49MG5 647 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 AADACL2Q6P093 401 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TMEM184AQ6ZMB5 413 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 VN1R5Q7Z5H4 357 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ADAT2Q7Z6V5 191 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 RBM23Q86U06 439 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TMC8Q8IU68 726 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CDKL3Q8IVW4 592 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 KLHL7Q8IXQ5 586 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PLD5Q8N7P1 536 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 KIAA1958Q8N8K9 716 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC89Q8N998 374 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NOA1Q8NC60 698 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 BBOF1Q8ND07 529 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 SLC35B2Q8TB61 432 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ACTL9Q8TC94 416 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 C1orf54Q8WWF1 131 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ALKBH8Q96BT7 664 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CORO1BQ9BR76 489 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 LRRC3Q9BY71 257 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ATXN3LQ9H3M9 355 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 TASP1Q9H6P5 420 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PIDD1Q9HB75 910 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ARHGEF4Q9NR80 690 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 GPATCH2LQ9NWQ4 482 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 SMARCAL1Q9NZC9 954 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 CALCOCO1Q9P1Z2 691 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 PPARGC1AQ9UBK2 798 aaKnown RBP6.81□□□□□ -1.32
VAMP3-202ENST00000470357 ZNF148Q9UQR1 794 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 NOTCH4Q99466 2003 aa6.81□□□□□ -1.32
VAMP3-202ENST00000470357 MYO18AQ92614 2054 aaKnown RBP6.8□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC195A0A1B0GUA6 201 aa6.8□□□□□ -1.32
VAMP3-202ENST00000470357 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
VAMP3-202ENST00000470357 MED19A0JLT2 244 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms