RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SUGP1Q8IWZ8 645 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC110Q8TBZ0 833 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 USP33Q8TEY7 942 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SPATA13Q96N96 652 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 LRRC1Q9BTT6 524 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 CEP41Q9BYV8 373 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RBM22Q9NW64 420 aaKnown RBP eCLIP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 WNT16Q9UBV4 365 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SHROOM3Q8TF72 1996 aa11.46□□□□□ -0.58
SREBF1-209ENST00000470247 KIAA1549LQ6ZVL6 1849 aa11.46□□□□□ -0.58
SREBF1-209ENST00000470247 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 SGK1O00141 431 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 ZBTB24O43167 697 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MTSS1O43312 755 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 GJB3O75712 270 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 TMCC1O94876 653 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 SLU7O95391 586 aaKnown RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 METTL18O95568 372 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 EGFP01133 1207 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 KRT14P02533 472 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 ASLP04424 464 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 HLA-DQB2P05538 268 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 CR2P20023 1033 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 CD72P21854 359 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 TNFRSF4P43489 277 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 RENBPP51606 427 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 LMNB2Q03252 620 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 NIPAL4Q0D2K0 466 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 DHX34Q14147 1143 aaKnown RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 RFTN1Q14699 578 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 EIF4HQ15056 248 aaKnown RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MLF2Q15773 248 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MARC1Q5VT66 337 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 ALG1LQ6GMV1 187 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 RETSATQ6NUM9 610 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 TPRG1Q6ZUI0 275 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 JAMLQ86YT9 394 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 KLHDC8BQ8IXV7 354 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 TSEN2Q8NCE0 465 aaKnown RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 ARRDC2Q8TBH0 407 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 FRS2Q8WU20 508 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MSANTD3Q96H12 275 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 CCDC114Q96M63 670 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 RUNDC3BQ96NL0 473 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 PSKH2Q96QS6 385 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 ACOX2Q99424 681 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 VAT1Q99536 393 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MGME1Q9BQP7 344 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 GORASP1Q9BQQ3 440 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 SEPT10Q9P0V9 454 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 THAP10Q9P2Z0 257 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 LHX3Q9UBR4 397 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 FEZ2Q9UHY8 353 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
SREBF1-209ENST00000470247 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
SREBF1-209ENST00000470247 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 FAM187AA6NFU0 413 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 OPHN1O60890 802 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ECEL1O95672 775 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 IFNB1P01574 187 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ATP5BP06576 529 aaKnown RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 SRPRAP08240 638 aaKnown RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 HNRNPLP14866 589 aaKnown RBP eCLIP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 MMP13P45452 471 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 STARD6P59095 220 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 MAXP61244 160 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 DR1Q01658 176 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PRKCQQ04759 706 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 FZD5Q13467 585 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ENPP2Q13822 863 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PTK6Q13882 451 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 CCINQ13939 588 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ZNF234Q14588 700 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 DLG2Q15700 870 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 P3H1Q32P28 736 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PREPLQ4J6C6 727 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 EGFLAMQ63HQ2 1017 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PID1Q7Z2X4 250 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PRPF39Q86UA1 669 aaKnown RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 UBALD2Q8IYN6 164 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 KDM1BQ8NB78 822 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 CCDC26Q8TAB7 109 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 GRK7Q8WTQ7 553 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 FAM3CQ92520 227 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ISG20Q96AZ6 181 aaKnown RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 TADA1Q96BN2 335 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 AGAP3Q96P47 875 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 TRIM51Q9BSJ1 452 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 TMEM245Q9H330 911 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 MTG2Q9H4K7 406 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 PCDH9Q9HC56 1237 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 NT5MQ9NPB1 228 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 ARHGEF3Q9NR81 526 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms