RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OMDQ99983 421 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 FUCA2Q9BTY2 467 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 OLFML3Q9NRN5 406 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 PANK4Q9NVE7 773 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 MARCH2Q9P0N8 246 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 SUN2Q9UH99 717 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CYTH4Q9UIA0 394 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 PLAAQ9Y263 795 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 ARHGEF17Q96PE2 2063 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 ATP8B3O60423 1300 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.53
PTPN4-209ENST00000469511 ITPR3Q14573 2671 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 A0A096LPE4 126 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 A0A1W2PPZ6 126 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 LRRIQ3A6PVS8 624 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SLC31A1O15431 190 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 TBL1XO60907 577 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ITGB2P05107 769 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 FAM200BP0CF97 657 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 RALAP11233 206 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 GOT1P17174 413 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 GAP43P17677 238 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 COL8A1P27658 744 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CASP1P29466 404 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SLC5A2P31639 672 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ABCD1P33897 745 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ASPAP45381 313 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CCR10P46092 362 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 DUSP3P51452 185 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 TAS2R38P59533 333 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 RPS24P62847 133 aaKnown RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 HMGN5P82970 282 aaKnown RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 KCNMA1Q12791 1236 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 BIRC3Q13489 604 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ESPL1Q14674 2120 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SURF1Q15526 300 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF699Q32M78 642 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 FAM133BQ5BKY9 247 aaKnown RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF667Q5HYK9 610 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 C1orf220Q5T0J3 134 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 MEI1Q5TIA1 1274 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 PIK3R6Q5UE93 754 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CEP135Q66GS9 1140 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 OR6B2Q6IFH4 312 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 FAM173BQ6P4H8 233 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 C20orf204Q6ZNR8 217 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 C1orf229Q6ZS94 237 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 EFL1Q7Z2Z2 1120 aaKnown RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ZFAND4Q86XD8 727 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 AHI1Q8N157 1196 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SLC22A18ASQ8N1D0 253 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CFAP52Q8N1V2 620 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 WFIKKN2Q8TEU8 576 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 GOLGA1Q92805 767 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 RNF34Q969K3 372 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 TTC17Q96AE7 1141 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SKA1Q96BD8 255 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SGF29Q96ES7 293 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 KLHDC7BQ96G42 594 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 TNIP3Q96KP6 325 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 PRICKLE1Q96MT3 831 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 DCLK3Q9C098 648 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ADAM19Q9H013 955 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ABCG4Q9H172 646 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 TCEAL2Q9H3H9 227 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 APOBEC3GQ9HC16 384 aaKnown RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 AGPAT3Q9NRZ7 376 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CLIC5Q9NZA1 410 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 PNMA8BQ9ULN7 279 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ERVW-1Q9UQF0 538 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF510Q9Y2H8 683 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 DAAM1Q9Y4D1 1078 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 PCDHA5Q9Y5H7 936 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 CLIC4Q9Y696 253 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 SHANK1Q9Y566 2161 aa5.46□□□□□ -1.54
PTPN4-209ENST00000469511 LRP4O75096 1905 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 OIP5O43482 229 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SLC26A4O43511 780 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 CLSTN1O94985 981 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 IL1BP01584 269 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ATP5BP06576 529 aaKnown RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ITIH1P19827 911 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ATICP31939 592 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 LONP1P36776 959 aaKnown RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ETV5P41161 510 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 YWHAGP61981 247 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 CNTN1Q12860 1018 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF177Q13360 481 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 STAT4Q14765 748 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SPRED3Q2MJR0 410 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 DEFB133Q30KQ1 61 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF394Q53GI3 561 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SGO2Q562F6 1265 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 RAB41Q5JT25 222 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 RRAGBQ5VZM2 374 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 GCNT7Q6ZNI0 430 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SV2BQ7L1I2 683 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms