RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 DDTLA6NHG4 134 aaPredicted RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 STMND1H3BQB6 276 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 EIF3FO00303 357 aaPredicted RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 SMAD6O43541 496 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 ATG13O75143 517 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 DDAH2O95865 285 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 TNFSF8P32971 234 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 MAPK9P45984 424 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 POLD2P49005 469 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 TDGQ13569 410 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 DHX8Q14562 1220 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 SYTL3Q4VX76 610 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 SH2D4BQ5SQS7 431 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 WASHC2DQ5SRD0 308 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 SLC16A12Q6ZSM3 486 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 ZNF354CQ86Y25 554 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 ANKRD18AQ8IVF6 992 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 MIGA1Q8NAN2 632 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 CEP76Q8TAP6 659 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 SPPL3Q8TCT6 385 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 SDCCAG3Q96C92 435 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 MSI2Q96DH6 328 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 RNFT2Q96EX2 444 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 PPP1R10Q96QC0 940 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 TEFMQ96QE5 360 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 FRG2BQ96QU4 278 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 NPAS1Q99742 590 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 ISCA1Q9BUE6 129 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 CXorf56Q9H5V9 222 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 STN1Q9H668 368 aaKnown RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 ENTPD7Q9NQZ7 604 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 SIRT3Q9NTG7 399 aaPredicted RBP3.42□□□□□ -1.86
TPR-204ENST00000469463 RRN3Q9NYV6 651 aa3.42□□□□□ -1.86
TPR-204ENST00000469463 TRBV5-7A0A0A0MS05 114 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 TARSL2A2RTX5 802 aaKnown RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 LACTBL1A8MY62 500 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 PRSS44E7EML9 344 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 LIASO43766 372 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 SLC25A17O43808 307 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 UNGP13051 313 aaPredicted RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 ARSAP15289 507 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CHRNB2P17787 502 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CNTFP26441 200 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 YWHAQP27348 245 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 AVPR1AP37288 418 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CDKN2AP42771 156 aaKnown RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 PPP3CCP48454 512 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 MVDP53602 400 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 PPFIA1Q13136 1202 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 NAA25Q14CX7 972 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 INO80DQ53TQ3 878 aaPredicted RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 FBXO47Q5MNV8 452 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CBWD5Q5RIA9 395 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 GORABQ5T7V8 394 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 OTUD1Q5VV17 481 aaPredicted RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 AADACL2Q6P093 401 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CPXCR1Q8N123 301 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CADM3Q8N126 398 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 FBXL14Q8N1E6 418 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 RASSF8Q8NHQ8 419 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 INPP5DQ92835 1189 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 GCC1Q96CN9 775 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 APOLD1Q96LR9 279 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 NPLQ9BXD5 320 aaPredicted RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 TWSG1Q9GZX9 223 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 SLC32A1Q9H598 525 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 CATSPERBQ9H7T0 1116 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 TTC12Q9H892 705 aaPredicted RBP3.41□□□□□ -1.86
TPR-204ENST00000469463 IL21RQ9HBE5 538 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 RASSF1Q9NS23 344 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 SLC22A11Q9NSA0 550 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 ZDHHC7Q9NXF8 308 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 FZD10Q9ULW2 581 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 MYO6Q9UM54 1294 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 DGKBQ9Y6T7 804 aa3.41□□□□□ -1.86
TPR-204ENST00000469463 VWA3AA6NCI4 1184 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 NPHP1O15259 732 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 IFNA2P01563 188 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 KLKB1P03952 638 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 TGFB3P10600 412 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 HOXB2P14652 356 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 HOXA11P31270 313 aaPredicted RBP3.4□□□□□ -1.87
TPR-204ENST00000469463 GJC1P36383 396 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 DPP6P42658 865 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 CCT5P48643 541 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 CDH12P55289 794 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 RUNX2Q13950 521 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 EDRF1Q3B7T1 1238 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 PLK5Q496M5 336 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 Q5PR19 223 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 ASPHD1Q5U4P2 390 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 DCAF12L2Q5VW00 463 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 ATG16L1Q676U5 607 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 HEPHL1Q6MZM0 1159 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 DENND1BQ6P3S1 775 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 SLC22A25Q6T423 547 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 C18orf65Q6ZTR6 163 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 SERPINA11Q86U17 422 aa3.4□□□□□ -1.87
TPR-204ENST00000469463 CHD1LQ86WJ1 897 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms