RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ARL14EPQ8N8R7 260 aaPredicted RBP5.49□□□□□ -1.53
LSM5-209ENST00000468872 KCNG4Q8TDN1 519 aa5.49□□□□□ -1.53
LSM5-209ENST00000468872 CNOT9Q92600 299 aaKnown RBP5.49□□□□□ -1.53
LSM5-209ENST00000468872 MAP4K1Q92918 833 aa5.49□□□□□ -1.53
LSM5-209ENST00000468872 CADM1Q9BY67 442 aaKnown RBP5.49□□□□□ -1.53
LSM5-209ENST00000468872 PPP1R14DQ9NXH3 145 aa5.49□□□□□ -1.53
LSM5-209ENST00000468872 HCN3Q9P1Z3 774 aa5.49□□□□□ -1.53
LSM5-209ENST00000468872 SPATA31D1Q6ZQQ2 1576 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 PGPEP1LA6NFU8 196 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 TNFSF14O43557 240 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 FCGR2AP12318 317 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 ATP5F1P24539 256 aaPredicted RBP5.48□□□□□ -1.53
LSM5-209ENST00000468872 HARS2P49590 506 aaKnown RBP5.48□□□□□ -1.53
LSM5-209ENST00000468872 PGM5Q15124 567 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 RABEP1Q15276 862 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 Q4G0T1 1027 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 ZNF667Q5HYK9 610 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 MZT2BQ6NZ67 158 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 INO80CQ6PI98 192 aaPredicted RBP5.48□□□□□ -1.53
LSM5-209ENST00000468872 C4orf50Q6ZRC1 276 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 PLD5Q8N7P1 536 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 FAM47BQ8NA70 645 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 OSR1Q8TAX0 266 aaPredicted RBP5.48□□□□□ -1.53
LSM5-209ENST00000468872 ADAMTS15Q8TE58 950 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 KAT2AQ92830 837 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 KAT2BQ92831 832 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 CHCHD6Q9BRQ6 235 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 SLC32A1Q9H598 525 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 VEZTQ9HBM0 779 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 SARDHQ9UL12 918 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 ICKQ9UPZ9 632 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 TNFSF13BQ9Y275 285 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 KDM3AQ9Y4C1 1321 aa5.48□□□□□ -1.53
LSM5-209ENST00000468872 RB1CC1Q8TDY2 1594 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 STRNO43815 780 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 HLA-DQA2P01906 255 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 RGS2P41220 211 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 STAT1P42224 750 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 NR4A2P43354 598 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 UFM1P61960 85 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 ZNF268Q14587 947 aaPredicted RBP5.47□□□□□ -1.53
LSM5-209ENST00000468872 PLK5Q496M5 336 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 SLC45A4Q5BKX6 768 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 PXDC1Q5TGL8 231 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 VWA5B1Q5TIE3 1220 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 MEX3CQ5U5Q3 659 aaKnown RBP5.47□□□□□ -1.53
LSM5-209ENST00000468872 C17orf99Q6UX52 265 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 TMTC3Q6ZXV5 915 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.47□□□□□ -1.53
LSM5-209ENST00000468872 KIF1BPQ96EK5 621 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 NR1H4Q96RI1 486 aaPredicted RBP5.47□□□□□ -1.53
LSM5-209ENST00000468872 FAM118BQ9BPY3 351 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.47□□□□□ -1.53
LSM5-209ENST00000468872 MOV10Q9HCE1 1003 aaKnown RBP5.47□□□□□ -1.53
LSM5-209ENST00000468872 TBC1D22BQ9NU19 505 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 TAS2R10Q9NYW0 307 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 NLKQ9UBE8 527 aa5.47□□□□□ -1.53
LSM5-209ENST00000468872 OR6C68A6NDL8 312 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 C2CD4BA6NLJ0 364 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 MSI1O43347 362 aaKnown RBP5.46□□□□□ -1.54
LSM5-209ENST00000468872 KCNAB3O43448 404 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 CEP104O60308 925 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 ADAP00813 363 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 UBL4AP11441 157 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 TFEBP19484 476 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 PLCD1P51178 756 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 EFNB1P98172 346 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 LAMB3Q13751 1172 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 ERV3-1Q14264 604 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 GALNT3Q14435 633 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 TBCEQ15813 527 aaPredicted RBP5.46□□□□□ -1.54
LSM5-209ENST00000468872 FAM171A1Q5VUB5 890 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 AWAT2Q6E213 333 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 ATF7IPQ6VMQ6 1270 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 NEK10Q6ZWH5 1172 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 DIS3L2Q8IYB7 885 aaKnown RBP5.46□□□□□ -1.54
LSM5-209ENST00000468872 METTL6Q8TCB7 284 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 IGFBPL1Q8WX77 278 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 HSPH1Q92598 858 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 HMCESQ96FZ2 354 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 FRG2BQ96QU4 278 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 BARD1Q99728 777 aaKnown RBP5.46□□□□□ -1.54
LSM5-209ENST00000468872 CXorf56Q9H5V9 222 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 PLEKHA5Q9HAU0 1116 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 ZNF304Q9HCX3 659 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 TRNAU1APQ9NX07 287 aaKnown RBP5.46□□□□□ -1.54
LSM5-209ENST00000468872 KCND2Q9NZV8 630 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 SWAP70Q9UH65 585 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 SLC8A2Q9UPR5 921 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 HECW2Q9P2P5 1572 aa5.46□□□□□ -1.54
LSM5-209ENST00000468872 TDRD9Q8NDG6 1382 aaKnown RBP5.45□□□□□ -1.54
LSM5-209ENST00000468872 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 C17orf113A0A1B0GUU1 675 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 A0A1W2PQM1 296 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 TARSL2A2RTX5 802 aaKnown RBP5.45□□□□□ -1.54
LSM5-209ENST00000468872 PABPN1LA6NDY0 278 aaKnown RBP5.45□□□□□ -1.54
LSM5-209ENST00000468872 TMEM247A6NEH6 219 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 NPIPB15A6NHN6 443 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms