RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RYBPQ8N488 228 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 RTL3Q8N8U3 475 aaKnown RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 OR6K2Q8NGY2 324 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 CCDC114Q96M63 670 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SLC6A18Q96N87 628 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 CAMK1GQ96NX5 476 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 EPAS1Q99814 870 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 TM6SF2Q9BZW4 377 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 MAGEH1Q9H213 219 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 NOL6Q9H6R4 1146 aaKnown RBP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 GAREM1Q9H706 876 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 AASDHPPTQ9NRN7 309 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 ARHGAP20Q9P2F6 1191 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 AP4E1Q9UPM8 1137 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SNX11Q9Y5W9 270 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 SCINQ9Y6U3 715 aa11.78□□□□□ -0.52
CDHR3-205ENST00000468143 EEF2KO00418 725 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 PLRG1O43660 514 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 BUB1O43683 1085 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 KDELR3O43731 214 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 SH3BP5O60239 455 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 LEFTY1O75610 366 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 TPM3P06753 285 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 ADRB1P08588 477 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 MYBL1P10243 752 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 CD59P13987 128 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 ETFBP38117 255 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 AFF3P51826 1226 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 AIF1P55008 147 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 TPI1P60174 286 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 TEAD4Q15561 434 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 PRAMEF14Q5SWL7 426 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 AGBL4Q5VU57 503 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 KLK6Q92876 244 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 IQCDQ96DY2 449 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 HMCESQ96FZ2 354 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 CEP44Q9C0F1 390 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 RETREG1Q9H6L5 497 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 HECAQ9UBI9 543 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-205ENST00000468143 ANKRD6Q9Y2G4 727 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 WASF2Q9Y6W5 498 aa11.77□□□□□ -0.53
CDHR3-205ENST00000468143 FRYLO94915 3013 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SPAARA0A1B0GVQ0 90 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 RASA4BC9J798 803 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SLC7A4O43246 635 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 DAPK3O43293 454 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 RASA4O43374 803 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CBFA2T2O43439 604 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 LRCH4O75427 683 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 GJB3O75712 270 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 PRNPP04156 253 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 WNT1P04628 370 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 TCF4P15884 667 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CSRP1P21291 193 aaKnown RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 EIF4A3P38919 411 aaKnown RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CCR5P51681 352 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 TAS2R38P59533 333 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 FAM193AP78312 1265 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 PPP6R3Q5H9R7 873 aaPredicted RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 PIP5KL1Q5T9C9 394 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 ALKBH5Q6P6C2 394 aaKnown RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 PCDH20Q8N6Y1 951 aaKnown RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 FAM131CQ96AQ9 280 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SERAC1Q96JX3 654 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 HEPHQ9BQS7 1158 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 ZDHHC5Q9C0B5 715 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SLC32A1Q9H598 525 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 ZDHHC6Q9H6R6 413 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 OSGEPQ9NPF4 335 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 DYRK4Q9NR20 520 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
CDHR3-205ENST00000468143 CEP250Q9BV73 2442 aa11.76□□□□□ -0.53
CDHR3-205ENST00000468143 SPTBN4Q9H254 2564 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 C10orf142B7Z368 130 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 KRIT1O00522 736 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms