RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PCDH8O95206 1070 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 CKMT2P17540 419 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 RECQLP46063 649 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-207ENST00000467819 CCDC15Q0P6D6 951 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 TARDBPQ13148 414 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL9A3-207ENST00000467819 ZNF284Q2VY69 593 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 NAA35Q5VZE5 725 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 FBXL19Q6PCT2 694 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 MSANTD4Q8NCY6 345 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 CPA5Q8WXQ8 436 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 NAA15Q9BXJ9 866 aaKnown RBP21.53■■□□□ 1.04
COL9A3-207ENST00000467819 SAMSN1Q9NSI8 373 aaKnown RBP21.53■■□□□ 1.04
COL9A3-207ENST00000467819 DACH1Q9UI36 760 aa21.53■■□□□ 1.04
COL9A3-207ENST00000467819 LSM8O95777 96 aaKnown RBP21.52■■□□□ 1.04
COL9A3-207ENST00000467819 MMEP08473 750 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 UCHL3P15374 230 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ERCC5P28715 1186 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-207ENST00000467819 AKT2P31751 481 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 NOMO3P69849 1222 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ARTNQ5T4W7 220 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 NEK5Q6P3R8 708 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 DPY19L3Q6ZPD9 716 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ERN2Q76MJ5 926 aaKnown RBP21.52■■□□□ 1.04
COL9A3-207ENST00000467819 OR13H1Q8NG92 308 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 CRELD1Q96HD1 420 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 CALN1Q9BXU9 219 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ATP13A1Q9HD20 1204 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 METTL5Q9NRN9 209 aaKnown RBP21.52■■□□□ 1.04
COL9A3-207ENST00000467819 TMEM59LQ9UK28 342 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ZFR2Q9UPR6 939 aaKnown RBP21.52■■□□□ 1.04
COL9A3-207ENST00000467819 AK5Q9Y6K8 562 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 ASXL3Q9C0F0 2248 aa21.52■■□□□ 1.04
COL9A3-207ENST00000467819 SHROOM3Q8TF72 1996 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 A0A087WV48 116 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 ILVBLA1L0T0 632 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 F8VZ95 297 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 TRIM38O00635 465 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 SIGLEC6O43699 453 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 LEFTY1O75610 366 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 HNRNPA2B1P22626 353 aaKnown RBP21.51■■□□□ 1.03
COL9A3-207ENST00000467819 DNA2P51530 1060 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 CLDN2P57739 230 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 ATP11AP98196 1134 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 SEMG2Q02383 582 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 PROX2Q3B8N5 592 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 SOWAHCQ53LP3 525 aaPredicted RBP21.51■■□□□ 1.03
COL9A3-207ENST00000467819 ACBD5Q5T8D3 534 aaPredicted RBP21.51■■□□□ 1.03
COL9A3-207ENST00000467819 SEL1L3Q68CR1 1132 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 DRC7Q8IY82 874 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 EMC1Q8N766 993 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 EPS8L1Q8TE68 723 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 PPP1R16AQ96I34 528 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 HAPLN3Q96S86 360 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 HDAC8Q9BY41 377 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 ZYG11BQ9C0D3 744 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 CAAP1Q9H8G2 361 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 TMEM51Q9NW97 253 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF212Q9UDV6 495 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 WASF2Q9Y6W5 498 aa21.51■■□□□ 1.03
COL9A3-207ENST00000467819 DGKAP23743 735 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 SERPINH1P50454 418 aaKnown RBP21.5■■□□□ 1.03
COL9A3-207ENST00000467819 ILKQ13418 452 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 ACAP1Q15027 740 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 RETSATQ6NUM9 610 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 GCNT7Q6ZNI0 430 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 BNIPLQ7Z465 357 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 PHLDB2Q86SQ0 1253 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 SLC25A45Q8N413 288 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 STK33Q9BYT3 514 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 NUP62CLQ9H1M0 184 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 KLHL11Q9NVR0 708 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 UCKL1Q9NWZ5 548 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 TAB2Q9NYJ8 693 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 CHMP5Q9NZZ3 219 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 FCF1Q9Y324 198 aaKnown RBP21.5■■□□□ 1.03
COL9A3-207ENST00000467819 ACTL7AQ9Y615 435 aa21.5■■□□□ 1.03
COL9A3-207ENST00000467819 FFAR2O15552 330 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF821O75541 412 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-207ENST00000467819 ZMPSTE24O75844 475 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 ACP1P24666 158 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 NEK3P51956 506 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 ARF5P84085 180 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 DAB2P98082 770 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 GNA12Q03113 381 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-207ENST00000467819 CDO1Q16878 200 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 RAB6CQ53S08 254 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 HS1BP3Q53T59 392 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 TCP11X2Q5H9J9 407 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF783Q6ZMS7 281 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 PCDH20Q8N6Y1 951 aaKnown RBP21.49■■□□□ 1.03
COL9A3-207ENST00000467819 SLC20A1Q8WUM9 679 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 CEP44Q9C0F1 390 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 RAB6CQ9H0N0 254 aa21.49■■□□□ 1.03
COL9A3-207ENST00000467819 GFPT2O94808 682 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 ABCG1P45844 678 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 CCNHP51946 323 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-207ENST00000467819 INSM1Q01101 510 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF211Q13398 564 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-207ENST00000467819 C15orf59Q2T9L4 293 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms