RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FZD4Q9ULV1 537 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 VPS4AQ9UN37 437 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 LYVE1Q9Y5Y7 322 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 PASKQ96RG2 1323 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 hCG_1807616A0A1W2PRN6 198 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 A0A1W2PRQ8 180 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 PER2O15055 1255 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 TGFB1I1O43294 461 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 CCNT1O60563 726 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 TSPAN9O75954 239 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 SEC14L2O76054 403 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 STARD3NLO95772 234 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 CYP4B1P13584 511 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 COX7A2P14406 83 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 SLC8A1P32418 973 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 MTNR1AP48039 350 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 SLC37A1P57057 533 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 NLRP5P59047 1200 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 UFM1P61960 85 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 RPL7AP62424 266 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 ARHGAP8P85298 464 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 B4GALNT1Q00973 533 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 MC1RQ01726 317 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 GHRHRQ02643 423 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 BYSLQ13895 437 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 DUSP28Q4G0W2 176 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 SH2D4BQ5SQS7 431 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 UBAP2Q5T6F2 1119 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 PXDC1Q5TGL8 231 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 RANBP10Q6VN20 620 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 KRT74Q7RTS7 529 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 TTC39CQ8N584 583 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 PIGOQ8TEQ8 1089 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 NCSTNQ92542 709 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 AKAP1Q92667 903 aaKnown RBP eCLIP4.47□□□□□ -1.694e-24■■■■■ 140.6
SMC4-208ENST00000467468 KCNJ9Q92806 393 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 FAM120BQ96EK7 910 aaKnown RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 LBHD1Q9BQE6 289 aaPredicted RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 NPLQ9BXD5 320 aaPredicted RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 ADGRE3Q9BY15 652 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 EPHX3Q9H6B9 360 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 TTC12Q9H892 705 aaPredicted RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 HCFC1R1Q9NWW0 138 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
SMC4-208ENST00000467468 SEMA5BQ9P283 1151 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 BTBD3Q9Y2F9 522 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 SNX8Q9Y5X2 465 aa4.47□□□□□ -1.69
SMC4-208ENST00000467468 RUSC2Q8N2Y8 1516 aa4.46□□□□□ -1.69
SMC4-208ENST00000467468 COL3A1P02461 1466 aaPredicted RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 SYNDIG1LA6NDD5 238 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CLIC1O00299 241 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 P4HA2O15460 535 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 USP12O75317 370 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 BCAR3O75815 825 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CHRM4P08173 479 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CSH1P0DML2 217 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CSH2P0DML3 217 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 PKMP14618 531 aaKnown RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 SFPQP23246 707 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMC4-208ENST00000467468 NDUFS1P28331 727 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 TACR3P29371 465 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 ICAM3P32942 547 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 GJC1P36383 396 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 PSMB10P40306 273 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 AGTR2P50052 363 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 EIF3BP55884 814 aaKnown RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 EFNB1P98172 346 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CHAF1BQ13112 559 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 BECN1Q14457 450 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 DAZAP2Q15038 168 aaPredicted RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 SLC9B1Q4ZJI4 515 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 SLC2A7Q6PXP3 512 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 IKBIPQ70UQ0 350 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 SZRD1Q7Z422 152 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 BRSK2Q8IWQ3 736 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CNTROBQ8N137 903 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 ZNF398Q8TD17 642 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 CNOT9Q92600 299 aaKnown RBP4.46□□□□□ -1.7
SMC4-208ENST00000467468 ZNF778Q96MU6 729 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 PIP5K1AQ99755 562 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 HDHD5Q9BXW7 423 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 TRIM31Q9BZY9 425 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 KLHL13Q9P2N7 655 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 HDAC6Q9UBN7 1215 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 B3GNT3Q9Y2A9 372 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 PKP3Q9Y446 797 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.7
SMC4-208ENST00000467468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.45□□□□□ -1.7
SMC4-208ENST00000467468 LIPT2A6NK58 231 aa4.45□□□□□ -1.7
SMC4-208ENST00000467468 C16orf96A6NNT2 1141 aa4.45□□□□□ -1.7
SMC4-208ENST00000467468 C17orf100A8MU93 164 aa4.45□□□□□ -1.7
SMC4-208ENST00000467468 TTC34A8MYJ7 566 aa4.45□□□□□ -1.7
SMC4-208ENST00000467468 E5RJQ4 531 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms