RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TMEM177Q53S58 311 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 TAF1BQ53T94 588 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 CPLX2Q6PUV4 134 aaKnown RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 PCSK4Q6UW60 755 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 Q6ZUG5 572 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 MAEAQ7L5Y9 396 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 OVCH1Q7RTY7 1134 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 KIF18BQ86Y91 864 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 DCP1BQ8IZD4 617 aaKnown RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 THEM5Q8N1Q8 247 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 PDILTQ8N807 584 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 FRMD1Q8N878 549 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 CADM4Q8NFZ8 388 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 OR2I1PQ8NGU4 316 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 OR2W6PQ8NHA6 318 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 FBXW5Q969U6 566 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 CEP295NLQ96MC4 621 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 TCEANC2Q96MN5 208 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 YTHDC1Q96MU7 727 aaKnown RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 KCNJ15Q99712 375 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 TCHPQ9BT92 498 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 JAM3Q9BX67 310 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 C17orf75Q9HAS0 396 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GOLGA6AQ9NYA3 693 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 CALCOCO1Q9P1Z2 691 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 WNT6Q9Y6F9 365 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 FLNCQ14315 2725 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 GOLGA4Q13439 2230 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 TTC26A0AVF1 554 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CCDC66A2RUB6 948 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 NEMP1O14524 444 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 WNT9AO14904 365 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 GPR39O43194 453 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 PAPSS1O43252 624 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 PCDHGA12O60330 932 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 KATNA1O75449 491 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SOAT2O75908 522 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 NOL4O94818 638 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 LDHAP00338 332 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CYBBP04839 570 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 DBHP09172 617 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CLTAP09496 248 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 VDRP11473 427 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 BPIP17213 487 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 GABRG2P18507 467 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SCP2P22307 547 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 FPR2P25090 351 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 RPA1P27694 616 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 PDIA3P30101 505 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 NMT1P30419 496 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 NTSR1P30989 418 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 MECP2P51608 486 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 ZNF132P52740 706 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 OSTNP61366 133 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 MVKQ03426 396 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 TLE3Q04726 772 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 RESTQ13127 1097 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 KCNB1Q14721 858 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 NOLC1Q14978 699 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CALCRLQ16602 461 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 ADCK5Q3MIX3 580 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SLC39A12Q504Y0 691 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CRB2Q5IJ48 1285 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 BICRALQ6AI39 1079 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 PAQR3Q6TCH7 311 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 METTL23Q86XA0 190 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CISD2Q8N5K1 135 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 OR10T2Q8NGX3 314 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SH3RF2Q8TEC5 729 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SNRNP27Q8WVK2 155 aaKnown RBP5.77□□□□□ -1.49
PTCD3-207ENST00000467273 FGF11Q92914 225 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 SLC39A13Q96H72 371 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 TTC1Q99614 292 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CCSER1Q9C0I3 900 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 PCED1AQ9H1Q7 454 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 GAREM1Q9H706 876 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 IFT22Q9H7X7 185 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 MARCH2Q9P0N8 246 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 GCNT4Q9P109 453 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 ARHGAP28Q9P2N2 729 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 TUBGCP4Q9UGJ1 667 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 CBLCQ9ULV8 474 aa5.77□□□□□ -1.49
PTCD3-207ENST00000467273 ANAPC1Q9H1A4 1944 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 PLK4O00444 970 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CPLX1O14810 134 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 BCAT2O15382 392 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CLDN3O15551 220 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TLX3O43711 291 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 DFNA5O60443 496 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 BRINP1O60477 761 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 NEMFO60524 1076 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TADA3O75528 432 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CYP17A1P05093 508 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 ADRB2P07550 413 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 HOXB2P14652 356 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 HDCP19113 662 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 OXTRP30559 389 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms