RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SETD9Q8NE22 299 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SLC5A5Q92911 643 aa8.83□□□□□ -1
HPS4-209ENST00000466781 MKL1Q969V6 931 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ASB2Q96Q27 587 aa8.83□□□□□ -1
HPS4-209ENST00000466781 FERD3LQ96RJ6 166 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ABCG4Q9H172 646 aa8.83□□□□□ -1
HPS4-209ENST00000466781 ATAD3AQ9NVI7 634 aa8.83□□□□□ -1
HPS4-209ENST00000466781 LYVE1Q9Y5Y7 322 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CA12O43570 354 aa8.83□□□□□ -1
HPS4-209ENST00000466781 KCNH1O95259 989 aa8.83□□□□□ -1
HPS4-209ENST00000466781 CATP04040 527 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 PRMT2P55345 433 aa8.83□□□□□ -1
HPS4-209ENST00000466781 LPIN1Q14693 890 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SCARA3Q6AZY7 606 aa8.83□□□□□ -1
HPS4-209ENST00000466781 FAM171BQ6P995 826 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SLC30A9Q6PML9 568 aa8.83□□□□□ -1
HPS4-209ENST00000466781 IKBIPQ70UQ0 350 aa8.83□□□□□ -1
HPS4-209ENST00000466781 FLCNQ8NFG4 579 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TAS1R2Q8TE23 839 aa8.83□□□□□ -1
HPS4-209ENST00000466781 SLC9A7Q96T83 725 aa8.83□□□□□ -1
HPS4-209ENST00000466781 TMEM79Q9BSE2 394 aa8.83□□□□□ -1
HPS4-209ENST00000466781 PABPC3Q9H361 631 aaKnown RBP8.83□□□□□ -1
HPS4-209ENST00000466781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.83□□□□□ -1
HPS4-209ENST00000466781 GSAPA4D1B5 854 aa8.82□□□□□ -1
HPS4-209ENST00000466781 GTPBP1O00178 669 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 GCATO75600 419 aa8.82□□□□□ -1
HPS4-209ENST00000466781 GZMAP12544 262 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ELNP15502 786 aa8.82□□□□□ -1
HPS4-209ENST00000466781 MTAPQ13126 283 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ZNF268Q14587 947 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 ABRAQ8N0Z2 381 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SLC2A14Q8TDB8 520 aa8.82□□□□□ -1
HPS4-209ENST00000466781 POPDC2Q9HBU9 364 aa8.82□□□□□ -1
HPS4-209ENST00000466781 INTS7Q9NVH2 962 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 PDE2AO00408 941 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 KPNA5O15131 536 aa8.82□□□□□ -1
HPS4-209ENST00000466781 TBL1XO60907 577 aa8.82□□□□□ -1
HPS4-209ENST00000466781 MT-CO1P00395 513 aa8.82□□□□□ -1
HPS4-209ENST00000466781 WARSP23381 471 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 CRATP43155 626 aa8.82□□□□□ -1
HPS4-209ENST00000466781 PRKAG1P54619 331 aa8.82□□□□□ -1
HPS4-209ENST00000466781 NAB1Q13506 487 aa8.82□□□□□ -1
HPS4-209ENST00000466781 KLHL17Q6TDP4 642 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SERPINA13PQ6UXR4 307 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ZNF720Q7Z2F6 126 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ADAM32Q8TC27 787 aa8.82□□□□□ -1
HPS4-209ENST00000466781 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 ELL3Q9HB65 397 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 PCDH9Q9HC56 1237 aa8.82□□□□□ -1
HPS4-209ENST00000466781 TMEM216Q9P0N5 145 aa8.82□□□□□ -1
HPS4-209ENST00000466781 AHDC1Q5TGY3 1603 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 TLL1O43897 1013 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ANXA6P08133 673 aa8.82□□□□□ -1
HPS4-209ENST00000466781 AMPD1P23109 780 aa8.82□□□□□ -1
HPS4-209ENST00000466781 PSMD4P55036 377 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 PFKPQ01813 784 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FAM110CQ1W6H9 321 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FAM46CQ5VWP2 391 aa8.82□□□□□ -1
HPS4-209ENST00000466781 HEATR4Q86WZ0 1026 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SEMA4DQ92854 862 aa8.82□□□□□ -1
HPS4-209ENST00000466781 TBCBQ99426 244 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FTHL17Q9BXU8 183 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ASB7Q9H672 318 aa8.82□□□□□ -1
HPS4-209ENST00000466781 MAPRE3Q9UPY8 281 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FAM86B1E9PN63 330 aa8.82□□□□□ -1
HPS4-209ENST00000466781 F8VZ95 297 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FGF10O15520 208 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 STX11O75558 287 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FAM86B2P0C5J1 330 aa8.82□□□□□ -1
HPS4-209ENST00000466781 GP5P40197 560 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SERPINH1P50454 418 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 ZNF135P52742 658 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 ACSM2AQ08AH3 577 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ACSM2BQ68CK6 577 aa8.82□□□□□ -1
HPS4-209ENST00000466781 DHFR2Q86XF0 187 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ADGRG2Q8IZP9 1017 aa8.82□□□□□ -1
HPS4-209ENST00000466781 DEFB106AQ8N104 65 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SPATA20Q8TB22 786 aa8.82□□□□□ -1
HPS4-209ENST00000466781 BSNDQ8WZ55 320 aa8.82□□□□□ -1
HPS4-209ENST00000466781 CEP44Q9C0F1 390 aa8.82□□□□□ -1
HPS4-209ENST00000466781 C6orf62Q9GZU0 229 aaPredicted RBP8.82□□□□□ -1
HPS4-209ENST00000466781 SLC40A1Q9NP59 571 aa8.82□□□□□ -1
HPS4-209ENST00000466781 TCF7L2Q9NQB0 619 aa8.82□□□□□ -1
HPS4-209ENST00000466781 MARCH2Q9P0N8 246 aa8.82□□□□□ -1
HPS4-209ENST00000466781 INVSQ9Y283 1065 aa8.82□□□□□ -1
HPS4-209ENST00000466781 AP3M1Q9Y2T2 418 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SNPHO15079 494 aa8.82□□□□□ -1
HPS4-209ENST00000466781 CCNDBP1O95273 360 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FTH1P02794 183 aa8.82□□□□□ -1
HPS4-209ENST00000466781 SLC6A3Q01959 620 aa8.82□□□□□ -1
HPS4-209ENST00000466781 EVX2Q03828 476 aa8.82□□□□□ -1
HPS4-209ENST00000466781 CAMK1Q14012 370 aa8.82□□□□□ -1
HPS4-209ENST00000466781 POM121L1PQ3SYA9 428 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ZCWPW2Q504Y3 356 aa8.82□□□□□ -1
HPS4-209ENST00000466781 HECTD3Q5T447 861 aa8.82□□□□□ -1
HPS4-209ENST00000466781 DDI2Q5TDH0 399 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ARMC3Q5W041 872 aa8.82□□□□□ -1
HPS4-209ENST00000466781 FAM126BQ8IXS8 530 aa8.82□□□□□ -1
HPS4-209ENST00000466781 ATL1Q8WXF7 558 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms