RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ING1Q9UK53 422 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 CYP2D7A0A087X1C5 515 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TEX13CA0A0J9YWL9 993 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 C2CD4BA6NLJ0 364 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TTC36A6NLP5 189 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 RNMTO43148 476 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TIPRLO75663 272 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 NEURL1O76050 574 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SEC14L2O76054 403 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 ADAP00813 363 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 IL1AP01583 271 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 LAMP2P13473 410 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 KLRC2P26717 231 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 BSGP35613 385 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC16A2P36021 539 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARL3P36405 182 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 CPOXP36551 454 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PTH2RP49190 550 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 RARSP54136 660 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 CFHR1Q03591 330 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 NEXNQ0ZGT2 675 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TBCEQ15813 527 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 CCNG2Q16589 344 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 GSTA3Q16772 222 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 EDRF1Q3B7T1 1238 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC9C1Q4G0N8 1177 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 FBXO43Q4G163 708 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC9B1Q4ZJI4 515 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC45A4Q5BKX6 768 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 ATG9BQ674R7 924 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 MIS18BP1Q6P0N0 1132 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZNF788Q6ZQV5 615 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 FASTKD5Q7L8L6 764 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 WDR5BQ86VZ2 330 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMC8Q8IU68 726 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 FAM185AQ8N0U4 392 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PLD5Q8N7P1 536 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC16A11Q8NCK7 471 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 NEK9Q8TD19 979 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 MPHOSPH8Q99549 860 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PIMREGQ9BSJ6 248 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TUBB6Q9BUF5 446 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 TTYH1Q9H313 450 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC32A1Q9H598 525 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PRKRIP1Q9H875 184 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 BRF2Q9HAW0 419 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PAPOLBQ9NRJ5 636 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 BABAM1Q9NWV8 329 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 NLKQ9UBE8 527 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 LAMP3Q9UQV4 416 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PCDHGB5Q9Y5G0 923 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 PSAT1Q9Y617 370 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
CDC42BPA-211ENST00000466538 KIR2DS5A0A0G2JLQ3 304 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 FSD2A1L4K1 749 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 PABPN1LA6NDY0 278 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 NPIPB15A6NHN6 443 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 FOXO6A8MYZ6 492 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 FAM157AC9JC47 383 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 KIR2DS3K7RE56 304 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 TAF4O00268 1085 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 GALTP07902 379 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 ACADMP11310 421 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 YWHAQP27348 245 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 GABRB2P47870 512 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 HARS2P49590 506 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARSFP54793 590 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 RPS13P62277 151 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 GHRHRQ02643 423 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 PMPCAQ10713 525 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 DCTN2Q13561 401 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 PGM5Q15124 567 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 DEF8Q6ZN54 512 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 KRTAP1-3Q8IUG1 177 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 RPAP2Q8IXW5 612 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZDHHC23Q8IYP9 409 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 KAT2AQ92830 837 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 KLHL29Q96CT2 875 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 SCAND2PQ9GZW5 306 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMX4Q9H1E5 349 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 ACTR5Q9H9F9 607 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZNF304Q9HCX3 659 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 RNF146Q9NTX7 359 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 FLRT1Q9NZU1 646 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 KIAA1456Q9P272 454 aa4.66□□□□□ -1.66
CDC42BPA-211ENST00000466538 TARSL2A2RTX5 802 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 C17orf102A2RUQ5 167 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 PRSS47A8MTI9 375 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 F8W810 466 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 PPP6CO00743 305 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 TMCC1O94876 653 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 NUDT3O95989 172 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 WNT1P04628 370 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 SPARCP09486 303 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 CTSAP10619 480 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 IRF1P10914 325 aa4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 ZNF8P17098 575 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-211ENST00000466538 PTPN2P17706 415 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms