RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 WDR83Q9BRX9 315 aaKnown RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 NPLQ9BXD5 320 aaPredicted RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 FRMD8Q9BZ67 464 aaPredicted RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 TMEM184CQ9NVA4 438 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 UPB1Q9UBR1 384 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 FBXO4Q9UKT5 387 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 CRYL1Q9Y2S2 319 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 GOLGA6L10A0A0M3HER8 536 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TCRBV7S3A2A0A539 114 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 SH2D7A6NKC9 451 aaPredicted RBP4.63□□□□□ -1.67
LRCH3-211ENST00000466054 B4DGG1 531 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 EYA2O00167 538 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 STRNO43815 780 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TULP3O75386 442 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 FCGR2AP12318 317 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 HOXD9P28356 352 aaPredicted RBP4.63□□□□□ -1.67
LRCH3-211ENST00000466054 PGM1P36871 562 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 MTNR1AP48039 350 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ME1P48163 572 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ALG10Q5BKT4 473 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ALG10BQ5I7T1 473 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF549Q6P9A3 640 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 AAGABQ6PD74 315 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 FAM185AQ8N0U4 392 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TMEM217Q8N7C4 229 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 SCAIQ8N9R8 606 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 NAXEQ8NCW5 288 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 LSM14AQ8ND56 463 aaKnown RBP4.63□□□□□ -1.67
LRCH3-211ENST00000466054 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 HTRA1Q92743 480 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 STAMQ92783 540 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ZFYVE19Q96K21 471 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 IFT27Q9BW83 186 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 CTDSP1Q9GZU7 261 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 FAM234AQ9H0X4 552 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TTC12Q9H892 705 aaPredicted RBP4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TLR8Q9NR97 1041 aaKnown RBP4.63□□□□□ -1.67
LRCH3-211ENST00000466054 RNF146Q9NTX7 359 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ALKBH4Q9NXW9 302 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 FBXO40Q9UH90 709 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TBX20Q9UMR3 447 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 DHDHQ9UQ10 334 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 TMEM98Q9Y2Y6 226 aa4.63□□□□□ -1.67
LRCH3-211ENST00000466054 OR6C68A6NDL8 312 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 FAM90A7PA6NKC0 464 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 C17orf100A8MU93 164 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 FAM90A22PA8MWA6 464 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 FAM90A12PA8MX19 464 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 FAM90A23PA8MXZ1 464 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 KIF1CO43896 1103 aaKnown RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 AGR2O95994 175 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 CYP19A1P11511 503 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 PRKCHP24723 683 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 SLC16A2P36021 539 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 SKIV2L2P42285 1042 aaKnown RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 PMPCAQ10713 525 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 TBX2Q13207 712 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 SH2D4BQ5SQS7 431 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 TMEM268Q5VZI3 342 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 GSG1LQ6UXU4 331 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 COLCA1Q6ZS62 124 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 ESX1Q8N693 406 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 RFWD2Q8NHY2 731 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 NOC3LQ8WTT2 800 aaKnown RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 HDAC7Q8WUI4 952 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 HVCN1Q96D96 273 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 PPM1MQ96MI6 270 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 HIPK3Q9H422 1215 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 ACAD9Q9H845 621 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 ACTR5Q9H9F9 607 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 SPAG4Q9NPE6 437 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 THSD1Q9NS62 852 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 CNOT7Q9UIV1 285 aaKnown RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 OSGIN2Q9Y236 505 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 CLDN16Q9Y5I7 305 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 TTBK1Q5TCY1 1321 aaPredicted RBP4.62□□□□□ -1.67
LRCH3-211ENST00000466054 MST1RQ04912 1400 aa4.62□□□□□ -1.67
LRCH3-211ENST00000466054 DDAH2O95865 285 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 CHRM4P08173 479 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 MTX1Q13505 466 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 BAK1Q16611 211 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 SMTNL2Q2TAL5 461 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 AP5B1Q2VPB7 878 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 PIK3CD-AS1Q5SR53 167 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 C6orf10Q5SRN2 563 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 JAKMIP3Q5VZ66 844 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 KDELC2Q7Z4H8 507 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 CCDC25Q86WR0 208 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 PAF1Q8N7H5 531 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 TSPYL6Q8N831 410 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 SETD9Q8NE22 299 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 FAR1Q8WVX9 515 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 CENPIQ92674 756 aaPredicted RBP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 NAP1L4Q99733 375 aaKnown RBP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 ZPBPQ9BS86 351 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 FUZQ9BT04 418 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms