RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SNAP91O60641 907 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 CLDN11O75508 207 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 SLC2A3P11169 496 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 NME1P15531 152 aaKnown RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 CCR1P32246 355 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 CHRNA3P32297 505 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 DUSP3P51452 185 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 HNRNPKP61978 463 aaKnown RBP eCLIP12.05□□□□□ -0.485e-7■□□□□ 10.3
CNOT4-208ENST00000465721 ZNF177Q13360 481 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 AUHQ13825 339 aaKnown RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 FGL2Q14314 439 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 FZD2Q14332 565 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 OTUD1Q5VV17 481 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 KIAA1614Q5VZ46 1190 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 ZCCHC8Q6NZY4 707 aaKnown RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 GUSBP11Q6P575 273 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-208ENST00000465721 Q6ZSR6 202 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 C14orf80Q86SX3 495 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 DEFB106AQ8N104 65 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 TMIEQ8NEW7 156 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 GRIN3AQ8TCU5 1115 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 ATXN7L3BQ96GX2 97 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 MED15Q96RN5 788 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 PPP1R9BQ96SB3 815 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 DUSP23Q9BVJ7 150 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 HDAC8Q9BY41 377 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 OSBPL2Q9H1P3 480 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 COX16Q9P0S2 106 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 SLC12A6Q9UHW9 1150 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 VPS51Q9UID3 782 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 PCDHGA8Q9Y5G5 932 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 ENTPD2Q9Y5L3 495 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 HS3ST4Q9Y661 456 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 RELNP78509 3460 aa12.05□□□□□ -0.48
CNOT4-208ENST00000465721 POM121BA6NF01 834 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CDRT15L2A8MXV6 281 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 SMAD6O43541 496 aaKnown RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 PAGE1O75459 146 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CNTN5O94779 1100 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 LETM1O95202 739 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CSF2P04141 144 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 PRNPP04156 253 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 KRT10P13645 584 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 KRT5P13647 590 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 RRM1P23921 792 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 PDX1P52945 283 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CDK17Q00537 523 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CDKN3Q16667 212 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 TPRG1LQ5T0D9 272 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 C22orf39Q6P5X5 142 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 PARGQ86W56 976 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 DCP2Q8IU60 420 aaKnown RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 DCAF4L2Q8NA75 395 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 ATP11CQ8NB49 1132 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 BMFQ96LC9 184 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 SLC46A1Q96NT5 459 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 ABCG4Q9H172 646 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 MUC3BQ9H195 1237 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 ACP6Q9NPH0 428 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 EVA1BQ9NVM1 165 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 ASNSD1Q9NWL6 643 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 KLF15Q9UIH9 416 aa12.04□□□□□ -0.48
CNOT4-208ENST00000465721 SPENQ96T58 3664 aaKnown RBP12.04□□□□□ -0.48
CNOT4-208ENST00000465721 SPTY2D1-AS1A0A0U1RR47 76 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 EME2A4GXA9 379 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 I6L893 689 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 PSMA7O14818 248 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CASC3O15234 703 aaKnown RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 RAD51BO15315 384 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 THAP12O43422 761 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 SLC28A2O43868 658 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 HSF2BPO75031 334 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 PCDH8O95206 1070 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 GLI1P08151 1106 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CDH4P55283 916 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CLN3Q13286 438 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 DRAP1Q14919 205 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CCDC40Q4G0X9 1142 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 ALFQ53S48 1182 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 PERM1Q5SV97 790 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 RBM44Q6ZP01 1051 aaKnown RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF683Q8IZ20 524 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 ZNF606Q8WXB4 792 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 RNF34Q969K3 372 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 GRAMD1AQ96CP6 724 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms