RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SGCZQ96LD1 299 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 PIGSQ96S52 555 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 RTKNQ9BST9 563 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 CADM1Q9BY67 442 aaKnown RBP5.39□□□□□ -1.55
SMC4-205ENST00000465563 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 CHPF2Q9P2E5 772 aa5.39□□□□□ -1.55
SMC4-205ENST00000465563 AGO1Q9UL18 857 aaKnown RBP5.39□□□□□ -1.55
SMC4-205ENST00000465563 NPIPB13A6NJU9 1138 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 NPIPB5A8MRT5 1133 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 NPIPB4C9JG80 1138 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 PARNO95453 639 aaKnown RBP5.38□□□□□ -1.55
SMC4-205ENST00000465563 CLDN7O95471 211 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 KRT10P13645 584 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 C21orf33P30042 268 aaPredicted RBP5.38□□□□□ -1.55
SMC4-205ENST00000465563 HILS1P60008 231 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 SPARCL1Q14515 664 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 WDR5BQ86VZ2 330 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 MUC20Q8N307 709 aaPredicted RBP5.38□□□□□ -1.55
SMC4-205ENST00000465563 NEXN-AS1Q8NBZ9 246 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 OR1N1Q8NGS0 311 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 LILRB1Q8NHL6 650 aaPredicted RBP5.38□□□□□ -1.55
SMC4-205ENST00000465563 C2CD4CQ8TF44 421 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 TNIP3Q96KP6 325 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 TCF7L2Q9NQB0 619 aa5.38□□□□□ -1.55
SMC4-205ENST00000465563 GOLGA6L3A6NEY3 463 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 CCNT1O60563 726 aaKnown RBP5.37□□□□□ -1.55
SMC4-205ENST00000465563 DDAH2O95865 285 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 UMODP07911 640 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 F7P08709 466 aaPredicted RBP5.37□□□□□ -1.55
SMC4-205ENST00000465563 GYS1P13807 737 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 BTKQ06187 659 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 PICALMQ13492 652 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 PTK2BQ14289 1009 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 RINLQ6ZS11 566 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 RAB11FIP2Q7L804 512 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 SCN4BQ8IWT1 228 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 ARRDC3Q96B67 414 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 SEPSECSQ9HD40 501 aaKnown RBP5.37□□□□□ -1.55
SMC4-205ENST00000465563 BAG5Q9UL15 447 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 DAPP1Q9UN19 280 aa5.37□□□□□ -1.55
SMC4-205ENST00000465563 DOCK7Q96N67 2140 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 DDTLA6NHG4 134 aaPredicted RBP5.36□□□□□ -1.55
SMC4-205ENST00000465563 HNRNPRO43390 633 aaKnown RBP5.36□□□□□ -1.55
SMC4-205ENST00000465563 IGLV2-11P01706 119 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 ITGA2BP08514 1039 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 MYBPC2Q14324 1141 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 RPS6KA2Q15349 733 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 FBXL22Q6P050 247 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 AADACL2Q6P093 401 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 SRLQ86TD4 932 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 CPT1BQ92523 772 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 TMEM18Q96B42 140 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 EID2BQ96D98 161 aa5.36□□□□□ -1.55
SMC4-205ENST00000465563 TEFMQ96QE5 360 aaKnown RBP5.36□□□□□ -1.55
SMC4-205ENST00000465563 ELAC1Q9H777 363 aaKnown RBP5.36□□□□□ -1.55
SMC4-205ENST00000465563 C19orf53Q9UNZ5 99 aaPredicted RBP5.36□□□□□ -1.55
SMC4-205ENST00000465563 NTN3O00634 580 aaPredicted RBP5.35□□□□□ -1.55
SMC4-205ENST00000465563 SYN3O14994 580 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 FFAR2O15552 330 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
SMC4-205ENST00000465563 SF3B4Q15427 424 aaKnown RBP eCLIP5.35□□□□□ -1.551e-7■■■■□ 22.3
SMC4-205ENST00000465563 GALNTL6Q49A17 601 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 IL31Q6EBC2 164 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 RETSATQ6NUM9 610 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 DSTYKQ6XUX3 929 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 GALNT7Q86SF2 657 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 PATL1Q86TB9 770 aaKnown RBP5.35□□□□□ -1.55
SMC4-205ENST00000465563 TRIM74Q86UV6 250 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 WBP1Q96G27 269 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 TXNDC15Q96J42 360 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 ADGRG7Q96K78 797 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 NODALQ96S42 347 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 PKP4Q99569 1192 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 KATNAL1Q9BW62 490 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 LHPPQ9H008 270 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 ARFGAP3Q9NP61 516 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 OBP2BQ9NPH6 170 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 KLQ9UEF7 1012 aa5.35□□□□□ -1.55
SMC4-205ENST00000465563 KDM4EB2RXH2 506 aaPredicted RBP5.34□□□□□ -1.55
SMC4-205ENST00000465563 LYL1P12980 280 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 CYP4B1P13584 511 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 PPM1AP35813 382 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 GNALP38405 381 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 SKIV2L2P42285 1042 aaKnown RBP5.34□□□□□ -1.55
SMC4-205ENST00000465563 DPP6P42658 865 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 MXI1P50539 228 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 RPS6KA3P51812 740 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 NCAPH2Q6IBW4 605 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 TMC8Q8IU68 726 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 SLC44A2Q8IWA5 706 aaPredicted RBP5.34□□□□□ -1.55
SMC4-205ENST00000465563 RBFAQ8N0V3 343 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 TMEM255BQ8WV15 326 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 DONSONQ9NYP3 566 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 NDUFAF4Q9P032 175 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 HERC5Q9UII4 1024 aaKnown RBP5.34□□□□□ -1.55
SMC4-205ENST00000465563 CDC23Q9UJX2 597 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 RCE1Q9Y256 329 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms