RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	CD160	O95971	181 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	MT-CO1	P00395	513 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	ADCY8	P40145	1251 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	MMP13	P45452	471 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	TERF1	P54274	439 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	GEMIN4	P57678	1058 aa	Known RBP	13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	ECT2L	Q008S8	904 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	GUCY2D	Q02846	1103 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	GPS1	Q13098	491 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	RFTN1	Q14699	578 aa	Predicted RBP	13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	PHTF2	Q8N3S3	785 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	TEX26	Q8N6G2	289 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	CNTD1	Q8N815	330 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	TERB1	Q8NA31	727 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	RPL10L	Q96L21	214 aa	Known RBP	13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	TEKT5	Q96M29	485 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	PHF12	Q96QT6	1004 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	CIPC	Q9C0C6	399 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	DPH5	Q9H2P9	285 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	NT5M	Q9NPB1	228 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	HEBP1	Q9NRV9	189 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	PAK5	Q9P286	719 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	SLC25A13	Q9UJS0	675 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	TRHDE	Q9UKU6	1024 aa		13.64	□□□□□ -0.23
ATF3-208	ENST00000465155	ESYT3	A0FGR9	886 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	PRRT4	C9JH25	899 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155		F5H423	210 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SPECC1L-ADORA2A	F8WAN1	911 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	TMCC1	O94876	653 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	HLA-DQB2	P05538	268 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SRF	P11831	508 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	CTH	P32929	405 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	STK19	P49842	368 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SERPINH1	P50454	418 aa	Known RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	PFKP	Q01813	784 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SULT2A1	Q06520	285 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	ZNF235	Q14590	738 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	NAA30	Q147X3	362 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	PREPL	Q4J6C6	727 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	INO80D	Q53TQ3	878 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	DUPD1	Q68J44	220 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	BBS5	Q8N3I7	341 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	ATP11C	Q8NB49	1132 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	MYRIP	Q8NFW9	859 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	CYB5D2	Q8WUJ1	264 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SORCS1	Q8WY21	1168 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	TTC17	Q96AE7	1141 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	CINP	Q9BW66	212 aa	Predicted RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	EPB41L5	Q9HCM4	733 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SEPT3	Q9UH03	358 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	RSPH14	Q9UHP6	348 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	FCF1	Q9Y324	198 aa	Known RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	SNX24	Q9Y343	169 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	PIAS3	Q9Y6X2	628 aa		13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	TCF20	Q9UGU0	1960 aa	Known RBP	13.63	□□□□□ -0.23
ATF3-208	ENST00000465155	TBC1D3B	A6NDS4	549 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155		K7ERQ8	282 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	KAT7	O95251	611 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	METTL18	O95568	372 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	APOD	P05090	189 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ATP5B	P06576	529 aa	Known RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	NFKB1	P19838	968 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	CD68	P34810	354 aa	Predicted RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	RPL21	P46778	160 aa	Known RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	GALK1	P51570	392 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	MAX	P61244	160 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	BASP1	P80723	227 aa	Known RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	SLC20A2	Q08357	652 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ITK	Q08881	620 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	CYTH1	Q15438	398 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	FAXC	Q5TGI0	409 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ITPRIPL1	Q6GPH6	555 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	C4orf22	Q6V702	233 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	SFTPA1	Q8IWL2	248 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	PGBD5	Q8N414	524 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	TSEN2	Q8NCE0	465 aa	Known RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	SNF8	Q96H20	258 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	P2RY13	Q9BPV8	354 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	GBA3	Q9H227	469 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ANKZF1	Q9H8Y5	726 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	SLC2A4RG	Q9NR83	387 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	RAB6B	Q9NRW1	208 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ELOVL2	Q9NXB9	296 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ERVW-1	Q9UQF0	538 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	HS3ST2	Q9Y278	367 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	ATP8A1	Q9Y2Q0	1164 aa		13.62	□□□□□ -0.23
ATF3-208	ENST00000465155	CXorf51A	A0A1B0GTR3	108 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	TARSL2	A2RTX5	802 aa	Known RBP	13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	SMAD6	O43541	496 aa	Known RBP	13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	ASL	P04424	464 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	SRC	P12931	536 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	IVD	P26440	423 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	PSMB4	P28070	264 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	GRIA2	P42262	883 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	EIF4H	Q15056	248 aa	Known RBP	13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	TRADD	Q15628	312 aa		13.61	□□□□□ -0.23
ATF3-208	ENST00000465155	IER5L	Q5T953	404 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms