RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 ISOC1Q96CN7 298 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 SGF29Q96ES7 293 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 TMA16Q96EY4 203 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 VPS39Q96JC1 886 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 GPR22Q99680 433 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 NPAS2Q99743 824 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 TRPV6Q9H1D0 765 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 HIPK3Q9H422 1215 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 MRM3Q9HC36 420 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 CASS4Q9NQ75 786 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 C20orf96Q9NUD7 363 aaPredicted RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 TBC1D23Q9NUY8 699 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 BFARQ9NZS9 450 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 ZDHHC2Q9UIJ5 367 aa7.41□□□□□ -1.22
USP48-206ENST00000464577 CNOT6Q9ULM6 557 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 PAIP2BQ9ULR5 123 aaKnown RBP7.41□□□□□ -1.22
USP48-206ENST00000464577 MAGEB16A2A368 324 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ERI2A8K979 691 aaKnown RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 TARM1B6A8C7 271 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 F5H423 210 aaPredicted RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 SDHDO14521 159 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 AP2A1O95782 977 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 CYP2C9P11712 490 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ZNF12P17014 697 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 GOT1P17174 413 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 TTKP33981 857 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ENTPD1P49961 510 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 LRP8Q14114 963 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 SQLEQ14534 574 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 TMEM132DQ14C87 1099 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 DLG2Q15700 870 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 FAM187BQ17R55 369 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 PDCD4Q53EL6 469 aaKnown RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 MTX3Q5HYI7 312 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 GLRA4Q5JXX5 417 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 NXNQ6DKJ4 435 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 HMBOX1Q6NT76 420 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 HERC6Q8IVU3 1022 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ZNF567Q8N184 647 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 CCDC185Q8N715 623 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 KDM1BQ8NB78 822 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 OR52K1Q8NGK4 314 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 TFAP2CQ92754 450 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 SLCO4A1Q96BD0 722 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 FAR2Q96K12 515 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 WRNIP1Q96S55 665 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 DOK1Q99704 481 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 FTHL17Q9BXU8 183 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 NFKBIZQ9BYH8 718 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 TASP1Q9H6P5 420 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 CAB39LQ9H9S4 337 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 LIN28AQ9H9Z2 209 aaKnown RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 AS3MTQ9HBK9 375 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 LRRC4Q9HBW1 653 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 PRMT7Q9NVM4 692 aaPredicted RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 ARMC1Q9NVT9 282 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 DUS2Q9NX74 493 aaKnown RBP7.4□□□□□ -1.22
USP48-206ENST00000464577 ARHGEF38Q9NXL2 777 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 ADA2Q9NZK5 511 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 CD300AQ9UGN4 299 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 FZD10Q9ULW2 581 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 MFHAS1Q9Y4C4 1052 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 AFG3L2Q9Y4W6 797 aa7.4□□□□□ -1.22
USP48-206ENST00000464577 DYTNA2CJ06 578 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 TRIM64BA6NI03 449 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 KCNU1A8MYU2 1149 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 ZBTB42B2RXF5 422 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 E7ENX8 843 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 INO80B-WBP1J3KQ70 363 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 TK2O00142 265 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 WNT10BO00744 389 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 MYF6P23409 242 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 CHRNA5P30532 468 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 STT3AP46977 705 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 POLD2P49005 469 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 NPY2RP49146 381 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 RPL34P49207 117 aaKnown RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 ATXN3P54252 364 aaPredicted RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 PFKPQ01813 784 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 ITGA7Q13683 1181 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 TNFAIP1Q13829 316 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 C16orf72Q14CZ0 275 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 PAFAH1B3Q15102 231 aaKnown RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 PSMD5Q16401 504 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 ZNF829Q3KNS6 432 aaPredicted RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 SAMD4BQ5PRF9 694 aaKnown RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 TREML2Q5T2D2 321 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 ARHGAP17Q68EM7 881 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 FAM45BPQ6NSW5 357 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 C8orf82Q6P1X6 216 aaPredicted RBP7.4□□□□□ -1.23
USP48-206ENST00000464577 METTL7BQ6UX53 244 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 KCNMB4Q86W47 210 aa7.4□□□□□ -1.23
USP48-206ENST00000464577 ZNF354CQ86Y25 554 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms