RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 WDR77Q9BQA1 342 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-205ENST00000464541 ISCUQ9H1K1 167 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 TAOK3Q9H2K8 898 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 KLHL31Q9H511 634 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 TLR8Q9NR97 1041 aaKnown RBP6.37□□□□□ -1.39
PTCD3-205ENST00000464541 SEL1LQ9UBV2 794 aa6.37□□□□□ -1.39
PTCD3-205ENST00000464541 SH2D7A6NKC9 451 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-205ENST00000464541 CHRM4P08173 479 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 CKMT1AP12532 417 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 ENO3P13929 434 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-205ENST00000464541 GPD2P43304 727 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 PPATQ06203 517 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTCD3-205ENST00000464541 EPHA10Q5JZY3 1008 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 SH2D4BQ5SQS7 431 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 WASHC2DQ5SRD0 308 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 ATG16L1Q676U5 607 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 TMEM163Q8TC26 289 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 PPM1EQ8WY54 764 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 KRCC1Q9NPI7 259 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-205ENST00000464541 ATP8A2Q9NTI2 1148 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 HDAC6Q9UBN7 1215 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 CDH22Q9UJ99 828 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 CNPY2Q9Y2B0 182 aa6.36□□□□□ -1.39
PTCD3-205ENST00000464541 CACNA1IQ9P0X4 2223 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-205ENST00000464541 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-205ENST00000464541 RPS10-NUDT3A0A1W2PQS6 291 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 FAM90A7PA6NKC0 464 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 FAM90A22PA8MWA6 464 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 FAM90A12PA8MX19 464 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 FAM90A23PA8MXZ1 464 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 H0YGN5 161 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 GUCY1B2O75343 617 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 CBX6O95503 412 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 SERPINC1P01008 464 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 HOXB2P14652 356 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ARSBP15848 533 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 CHRNB2P17787 502 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 GPR12P47775 334 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 RFX2P48378 723 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 DUSP6Q16828 381 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 HEPHL1Q6MZM0 1159 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 C9orf47Q6ZRZ4 202 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 C7orf57Q8NEG2 295 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ZMIZ2Q8NF64 920 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ENTPD7Q9NQZ7 604 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 TMEM160Q9NX00 188 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 ALKBH4Q9NXW9 302 aa6.35□□□□□ -1.39
PTCD3-205ENST00000464541 LRRFIP2Q9Y608 721 aaKnown RBP6.35□□□□□ -1.39
PTCD3-205ENST00000464541 STMND1H3BQB6 276 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 INSIG1O15503 277 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 IL1AP01583 271 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 PSMC2P35998 433 aaKnown RBP6.34□□□□□ -1.39
PTCD3-205ENST00000464541 AVPR1AP37288 418 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 DPP6P42658 865 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 CCR5P51681 352 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 ZP1P60852 638 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 SLC18A3Q16572 532 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 TRIM74Q86UV6 250 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 TRIM73Q86UV7 250 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 GHDCQ8N2G8 530 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 HORMAD2Q8N7B1 307 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 LSM14AQ8ND56 463 aaKnown RBP6.34□□□□□ -1.39
PTCD3-205ENST00000464541 NOC3LQ8WTT2 800 aaKnown RBP6.34□□□□□ -1.39
PTCD3-205ENST00000464541 RAB40AQ8WXH6 277 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 RBM38Q9H0Z9 239 aaKnown RBP6.34□□□□□ -1.39
PTCD3-205ENST00000464541 CATSPERBQ9H7T0 1116 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 GJD2Q9UKL4 321 aa6.34□□□□□ -1.39
PTCD3-205ENST00000464541 A0A096LPK6 155 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 GOLGA6L10A0A0M3HER8 536 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 CCDC196A0A1B0GTZ2 297 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 FAM157AC9JC47 383 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 HSPB6O14558 160 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 NCAM2O15394 837 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 NTN1O95631 604 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 ENTPD1P49961 510 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 FOXG1P55316 489 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-205ENST00000464541 SELENOVP59797 346 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 RETSATQ6NUM9 610 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 TMEM71Q6P5X7 295 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 LRRC8DQ7L1W4 858 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 OR4N2Q8NGD1 307 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 RFWD2Q8NHY2 731 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 HSPH1Q92598 858 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 CNOT9Q92600 299 aaKnown RBP6.33□□□□□ -1.4
PTCD3-205ENST00000464541 STAMQ92783 540 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 RRN3Q9NYV6 651 aa6.33□□□□□ -1.4
PTCD3-205ENST00000464541 C17orf113A0A1B0GUU1 675 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 TARSL2A2RTX5 802 aaKnown RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 ADAP00813 363 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 CYP1A2P05177 515 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 CDC25AP30304 524 aa6.32□□□□□ -1.4
PTCD3-205ENST00000464541 RFC1P35251 1148 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-205ENST00000464541 BLKP51451 505 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms