RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 TRIM11Q96F44 468 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
XRN1-203ENST00000463916 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 SCINQ9Y6U3 715 aa13.24□□□□□ -0.29
XRN1-203ENST00000463916 WNT9AO14904 365 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 TPM3P06753 285 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 KCNA4P22459 653 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 CD27P26842 260 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 IL1R2P27930 398 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 EIF4A3P38919 411 aaKnown RBP13.23□□□□□ -0.29
XRN1-203ENST00000463916 TAS2R38P59533 333 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 PPP2CBP62714 309 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 PPP2CAP67775 309 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
XRN1-203ENST00000463916 VSTM4Q8IW00 320 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 GRIN3AQ8TCU5 1115 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
XRN1-203ENST00000463916 DNAJC7Q99615 494 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 EPAS1Q99814 870 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 IL21RQ9HBE5 538 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 MRPL47Q9HD33 250 aaKnown RBP13.23□□□□□ -0.29
XRN1-203ENST00000463916 WASF2Q9Y6W5 498 aa13.23□□□□□ -0.29
XRN1-203ENST00000463916 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 A0A1B0GVT2 93 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 LRRC72A6NJI9 287 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 WASH4PA8MWX3 477 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 KDELR3O43731 214 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 GJB3O75712 270 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 RNF8O76064 485 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 KCNK5O95279 499 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 GKP32189 559 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 DNA2P51530 1060 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 ASTE1Q2TB18 679 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 CCDC122Q5T0U0 273 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 PIP5KL1Q5T9C9 394 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 FAM46CQ5VWP2 391 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TXNRD3NBQ6F5E7 133 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 VPS36Q86VN1 386 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TM6SF2Q9BZW4 377 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 CEP44Q9C0F1 390 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 PLXNA2O75051 1894 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3DA0A087WVF3 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3IA0A087WXS9 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3EA0A087X179 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 A0A1W2PPC4 97 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3LB9A6J9 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 PLRG1O43660 514 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 LEFTY1O75610 366 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 CYP1A2P05177 515 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 SYPP08247 313 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3HP0C7X1 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 DESP17661 470 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 ETFBP38117 255 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 AFF3P51826 1226 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 TPI1P60174 286 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 FOXK2Q01167 660 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3CQ6IPX1 549 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 PSAPL1Q6NUJ1 521 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 TBC1D3Q8IZP1 549 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 UMODL1-AS1Q8N2C9 162 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 PCDH20Q8N6Y1 951 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 OR8K1Q8NGG5 319 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 OR6K2Q8NGY2 324 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 CHP1Q99653 195 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 PACSIN1Q9BY11 444 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 DNAAF2Q9NVR5 837 aaKnown RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 IL36AQ9UHA7 158 aa13.22□□□□□ -0.29
XRN1-203ENST00000463916 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
XRN1-203ENST00000463916 RASA4BC9J798 803 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 RASA4O43374 803 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 PRPSAP2O60256 369 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 CCNHP51946 323 aaPredicted RBP13.21□□□□□ -0.29
XRN1-203ENST00000463916 SERINC3Q13530 473 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 KIF19Q2TAC6 998 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 CARD16Q5EG05 197 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 PPP6R3Q5H9R7 873 aaPredicted RBP13.21□□□□□ -0.29
XRN1-203ENST00000463916 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.29
XRN1-203ENST00000463916 SLC6A18Q96N87 628 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 LRRC19Q9H756 370 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms