RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 LILRB5O75023 590 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 MAP3K6O95382 1288 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 SERPINB6P35237 376 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 RPS14P62263 151 aaKnown RBP19.29■□□□□ 0.68
LMNB1-204ENST00000463908 IL10RBQ08334 325 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 GALNT2Q10471 571 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 ODF2Q5BJF6 829 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 C22orf39Q6P5X5 142 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 RFX6Q8HWS3 928 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 PGBD3Q8N328 593 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 FRMD1Q8N878 549 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 LRRN4Q8WUT4 740 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 VOPP1Q96AW1 172 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 CEP44Q9C0F1 390 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 PRDM16Q9HAZ2 1276 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 TRMT1Q9NXH9 659 aaKnown RBP19.29■□□□□ 0.68
LMNB1-204ENST00000463908 DTLQ9NZJ0 730 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 BCCIPQ9P287 314 aaKnown RBP eCLIP19.29■□□□□ 0.68
LMNB1-204ENST00000463908 ZFHX2Q9C0A1 2572 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 MIF4GDA9UHW6 222 aaKnown RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 RNF103O00237 685 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 MCF2LO15068 1137 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 CST8O60676 142 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 GEMIN4P57678 1058 aaKnown RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 SRSF5Q13243 272 aaKnown RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 TFDP3Q5H9I0 405 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 MEI1Q5TIA1 1274 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 NPNTQ6UXI9 565 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 RLN3Q8WXF3 142 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 ISG20Q96AZ6 181 aaKnown RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 RBM41Q96IZ5 413 aaKnown RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 HEMGNQ9BXL5 484 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 CD93Q9NPY3 652 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 SAE1Q9UBE0 346 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 UBA2Q9UBT2 640 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-204ENST00000463908 SARDHQ9UL12 918 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 INVSQ9Y283 1065 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 R4GN57 208 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 CKAP5Q14008 2032 aa19.28■□□□□ 0.68
LMNB1-204ENST00000463908 NYNRINQ9P2P1 1898 aaKnown RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 USP27XA6NNY8 438 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 APOL1O14791 398 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 ZSCAN12O43309 604 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 BNIP3LO60238 219 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 TMCC1O94876 653 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 GARSP41250 739 aaKnown RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 COPS2P61201 443 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 PPP2R5EQ16537 467 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 MAP7D1Q3KQU3 841 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 CARD16Q5EG05 197 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 DCAF12L1Q5VU92 463 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 KAZNQ674X7 775 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 DPY19L3Q6ZPD9 716 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 METTL3Q86U44 580 aaKnown RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 MMAAQ8IVH4 418 aaKnown RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 CCDC50Q8IVM0 306 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 PLPP6Q8IY26 295 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 PCDH20Q8N6Y1 951 aaKnown RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 CHST14Q8NCH0 376 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 CASKIN2Q8WXE0 1202 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 SIPA1Q96FS4 1042 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 ITM2CQ9NQX7 267 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 PPM1HQ9ULR3 514 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 PCDHGA2Q9Y5H1 932 aa19.27■□□□□ 0.68
LMNB1-204ENST00000463908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
LMNB1-204ENST00000463908 ZBTB24O43167 697 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 CTSLP07711 333 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 ZFXP17010 805 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 DNA2P51530 1060 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 DYNLT1P63172 113 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 SLC10A7Q0GE19 358 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 ZNF211Q13398 564 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 TFDP2Q14188 446 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 ELAVL3Q14576 367 aaKnown RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 CACUL1Q86Y37 369 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 LRRC49Q8IUZ0 686 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 UBL4BQ8N7F7 174 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 UBE2Q2Q8WVN8 375 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 PRCCQ92733 491 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 ATOH1Q92858 354 aaPredicted RBP19.26■□□□□ 0.67
LMNB1-204ENST00000463908 TSGA13Q96PP4 275 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 OSBPL8Q9BZF1 889 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 TM6SF2Q9BZW4 377 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 FBRSQ9HAH7 460 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 SP110Q9HB58 689 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 FAM86C1Q9NVL1 165 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 LHX3Q9UBR4 397 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 EFR3BQ9Y2G0 817 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 HEY1Q9Y5J3 304 aa19.26■□□□□ 0.67
LMNB1-204ENST00000463908 MUSKO15146 869 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 GSRP00390 522 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 PECAM1P16284 738 aaPredicted RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 CHRNA3P32297 505 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 PTPN7P35236 360 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 RGRP47804 291 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 TPMTP51580 245 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 METAP1P53582 386 aa19.25■□□□□ 0.67
LMNB1-204ENST00000463908 USP39Q53GS9 565 aaKnown RBP19.25■□□□□ 0.67
LMNB1-204ENST00000463908 ATXN7L2Q5T6C5 722 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms