RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PCDHA13	Q9Y5I0	950 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	CEP250	Q9BV73	2442 aa		9.81	□□□□□ -0.84
PSMD4-208	ENST00000462970	ANKRD36	A6QL64	1941 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	BCLAF3	A2AJT9	711 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	LRRD1	A4D1F6	860 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ARHGAP42	A6NI28	874 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	C1QTNF3-AMACR	E9PGA6	284 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	KRIT1	O00522	736 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SPOP	O43791	374 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZMPSTE24	O75844	475 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	FSBP	O95073	299 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	NDUFA10	O95299	355 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	KRT7	P08729	469 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	CHRNA3	P32297	505 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ACSL1	P33121	698 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	PAPOLA	P51003	745 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	CLCN6	P51797	869 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	METAP1	P53582	386 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	YBEY	P58557	167 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	RHOA	P61586	193 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ARF5	P84085	180 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SLC25A11	Q02978	314 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZBTB16	Q05516	673 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZNF33A	Q06730	810 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SLC20A2	Q08357	652 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	MMRN1	Q13201	1228 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SERINC3	Q13530	473 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SF3A2	Q15428	464 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	DPYSL2	Q16555	572 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	PARP15	Q460N3	678 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	AASDH	Q4L235	1098 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SYCP2L	Q5T4T6	812 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	FAM46C	Q5VWP2	391 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	TCEAL6	Q6IPX3	200 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	METTL3	Q86U44	580 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	UMODL1-AS1	Q8N2C9	162 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	PAF1	Q8N7H5	531 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	OR6K2	Q8NGY2	324 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	PIP4K2C	Q8TBX8	421 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	TCEAL3	Q969E4	200 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	CSPG4P5	Q96PW8	444 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SLC39A8	Q9C0K1	460 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	BTBD1	Q9H0C5	482 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SP110	Q9HB58	689 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	DYRK4	Q9NR20	520 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SEMA4G	Q9NTN9	838 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	WSB2	Q9NYS7	404 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	IMPACT	Q9P2X3	320 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	UBA2	Q9UBT2	640 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	SERGEF	Q9UGK8	458 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	LCMT1	Q9UIC8	334 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	INTU	Q9ULD6	942 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	EPN1	Q9Y6I3	576 aa	Predicted RBP	9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	CFAP54	Q96N23	3096 aa		9.8	□□□□□ -0.84
PSMD4-208	ENST00000462970	DOCK9	Q9BZ29	2069 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	WASH4P	A8MWX3	477 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970		J3KR12	359 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	MCF2L	O15068	1137 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	TMCC1	O94876	653 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	SEMA4F	O95754	770 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	KRT1	P04264	644 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	CD48	P09326	243 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	C5AR1	P21730	350 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	MAOB	P27338	520 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	MAN1A1	P33908	653 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ARHGAP25	P42331	645 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ID4	P47928	161 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	HCAR3	P49019	387 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ZNF135	P52742	658 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	NDST2	P52849	883 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	DPYS	Q14117	519 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	CARD16	Q5EG05	197 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ARSI	Q5FYB1	569 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	WDR45B	Q5MNZ6	344 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	DCAF12L1	Q5VU92	463 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	RAD9B	Q6WBX8	426 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	DPY19L3	Q6ZPD9	716 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	POLN	Q7Z5Q5	900 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	SLC41A1	Q8IVJ1	513 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	AADAT	Q8N5Z0	425 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	PCDH20	Q8N6Y1	951 aa	Known RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	NPW	Q8N729	165 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ACRBP	Q8NEB7	543 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	OR2A12	Q8NGT7	310 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	OR14C36	Q8NHC7	312 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	FOXJ1	Q92949	421 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	RNF25	Q96BH1	459 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	DESI2	Q9BSY9	194 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	CEP44	Q9C0F1	390 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	NEUROG2	Q9H2A3	272 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	C6orf106	Q9H6K1	298 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	VPS45	Q9NRW7	570 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	ETNK2	Q9NVF9	386 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	HECA	Q9UBI9	543 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	IL36A	Q9UHA7	158 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	SARDH	Q9UL12	918 aa		9.79	□□□□□ -0.84
PSMD4-208	ENST00000462970	SCML1	Q9UN30	329 aa		9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms