RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 RNF43Q68DV7 783 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 ATP11CQ8NB49 1132 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 OSCP1Q8WVF1 389 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 BHMTQ93088 406 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 TBC1D31Q96DN5 1066 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 ASIC4Q96FT7 647 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 PRICKLE1Q96MT3 831 aaPredicted RBP18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 CSPG4P5Q96PW8 444 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 THG1LQ9NWX6 298 aaKnown RBP18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 MPP6Q9NZW5 540 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 LIMD1Q9UGP4 676 aa18.43■□□□□ 0.54
ATPAF2-202ENST00000462733 ANHXE9PGG2 379 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 MGRN1O60291 552 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ECI2O75521 394 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ZSCAN5DPP0CG00 497 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 RPS24P62847 133 aaKnown RBP18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 CBLBQ13191 982 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ACBD5Q5T8D3 534 aaPredicted RBP18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 MANEALQ5VSG8 457 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 RFX8Q6ZV50 586 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 CIR1Q86X95 450 aaPredicted RBP18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 FAM217AQ8IXS0 508 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ZNF683Q8IZ20 524 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 PLCD3Q8N3E9 789 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 CCDC63Q8NA47 563 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ACTL9Q8TC94 416 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 ZNF670Q9BS34 389 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 TRABDQ9H4I3 376 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 PSMC3IPQ9P2W1 217 aaPredicted RBP18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 TBK1Q9UHD2 729 aa18.42■□□□□ 0.54
ATPAF2-202ENST00000462733 E7ESA3 106 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 APOC4-APOC2K7ER74 178 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 APOC2P02655 101 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 PSMC3P17980 439 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 AMPD1P23109 780 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 OTUD4Q01804 1114 aaKnown RBP18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 SPARCL1Q14515 664 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 RABGAP1LQ5R372 815 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 ARTNQ5T4W7 220 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 PRUNE1Q86TP1 453 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 RFX6Q8HWS3 928 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 CPXM2Q8N436 756 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 DENND1AQ8TEH3 1009 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 TMA16Q96EY4 203 aaKnown RBP18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 TMEM121Q9BTD3 319 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 EBF3Q9H4W6 596 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 VPS37BQ9H9H4 285 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 NEU3Q9UQ49 428 aa18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.41■□□□□ 0.54
ATPAF2-202ENST00000462733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 CST8O60676 142 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 TBL1XO60907 577 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 CNTN5O94779 1100 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ASMTLO95671 621 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ARSAP15289 507 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 TAC1P20366 129 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 GDI1P31150 447 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 GTF2A1P52655 376 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 DYNLT1P63172 113 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 FCHO2Q0JRZ9 810 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 PDIA2Q13087 525 aaKnown RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 RIPK1Q13546 671 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 KLHL38Q2WGJ6 581 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 EML3Q32P44 896 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ALFQ53S48 1182 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 TMEM25Q86YD3 366 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ZBED8Q8IZ13 594 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ADGRG2Q8IZP9 1017 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 PCDH19Q8TAB3 1148 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 GDAP1Q8TB36 358 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 DDI1Q8WTU0 396 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 OTUB2Q96DC9 234 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 RNF157Q96PX1 679 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 SMC6Q96SB8 1091 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ZYG11BQ9C0D3 744 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ABCF3Q9NUQ8 709 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 RCOR3Q9P2K3 495 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 STARD13Q9Y3M8 1113 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 NUP205Q92621 2012 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 IGLV3-10A0A075B6K4 115 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 DRGXA6NNA5 263 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ETS1P14921 441 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ERCC2P18074 760 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 SKIV2L2P42285 1042 aaKnown RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ZNF135P52742 658 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 GEMIN4P57678 1058 aaKnown RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 BNIP1Q12981 228 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 DPYSQ14117 519 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 ANO4Q32M45 955 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 LY6G5CQ5SRR4 150 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 TFAP2DQ7Z6R9 452 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 KIAA1958Q8N8K9 716 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 NAT8LQ8N9F0 302 aa18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 HJURPQ8NCD3 748 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-202ENST00000462733 IRF7Q92985 503 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms