RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 NR2C2P49116 596 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 COPAP53621 1224 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 CSTF1Q05048 431 aaKnown RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 ANGPT1Q15389 498 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 C9orf64Q5T6V5 341 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 SEL1L2Q5TEA6 688 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 Q6ZVU0 165 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 CAMKK1Q8N5S9 505 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 PCDH20Q8N6Y1 951 aaKnown RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 P3H4Q92791 437 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 HAUS1Q96CS2 278 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 ZNF599Q96NL3 588 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 OLFM3Q96PB7 478 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 TNKS2Q9H2K2 1166 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 FBXO4Q9UKT5 387 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 CACNA1IQ9P0X4 2223 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 CKAP5Q14008 2032 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 APOC4-APOC2K7ER74 178 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 BNIP3LO60238 219 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 ALDH1A2O94788 518 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 TJP3O95049 919 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 APBB3O95704 486 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 PEX11BO96011 259 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 APOC2P02655 101 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 GABRG2P18507 467 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CCNCP24863 283 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 PXNP49023 591 aaPredicted RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 RHOAP61586 193 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 GNG11P61952 73 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 LBRQ14739 615 aaKnown RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 PDK1Q15118 436 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CYTH1Q15438 398 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CARD16Q5EG05 197 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 TMCO4Q5TGY1 634 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CCDC181Q5TID7 509 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 RASSF3Q86WH2 238 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CCNYQ8ND76 341 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 MDGA1Q8NFP4 955 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 OR2A12Q8NGT7 310 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 HMGB4Q8WW32 186 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 ISG20Q96AZ6 181 aaKnown RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 HDAC11Q96DB2 347 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 CCDC114Q96M63 670 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 TSGA13Q96PP4 275 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 FAM129BQ96TA1 746 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 LGMNQ99538 433 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 TM6SF2Q9BZW4 377 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 MKRN2Q9H000 416 aaKnown RBP12□□□□□ -0.49
CPNE1-221ENST00000462352 SLC6A17Q9H1V8 727 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 FBRSQ9HAH7 460 aa12□□□□□ -0.49
CPNE1-221ENST00000462352 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
CPNE1-221ENST00000462352 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 MCF2LO15068 1137 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 MATN3O15232 486 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 GSRP00390 522 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 NDUFV2P19404 249 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 HOXA6P31267 233 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 CXCR5P32302 372 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 RECQLP46063 649 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 DMWDQ09019 674 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 SLC10A7Q0GE19 358 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 KLF1Q13351 362 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 ELAVL3Q14576 367 aaKnown RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 RFTN1Q14699 578 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 NOMO1Q15155 1222 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 HEATR6Q6AI08 1181 aaKnown RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 TIGD7Q6NT04 549 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 DPY19L3Q6ZPD9 716 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 SLC13A5Q86YT5 568 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 TMPRSS6Q8IU80 811 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 CCDC13Q8IYE1 715 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 STK40Q8N2I9 435 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 TSEN2Q8NCE0 465 aaKnown RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 OR2AP1Q8NGE2 309 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 ACTL9Q8TC94 416 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 NSMCE1Q8WV22 266 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 OR8D1Q8WZ84 308 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 FATE1Q969F0 183 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 MRGPRX1Q96LB2 322 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 WDR24Q96S15 920 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 CINPQ9BW66 212 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 TPSD1Q9BZJ3 242 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 BRD8Q9H0E9 1235 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 RSPH9Q9H1X1 276 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
CPNE1-221ENST00000462352 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 EBF1Q9UH73 591 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
CPNE1-221ENST00000462352 TCRBV7S2A1N4TA0A589 114 aa11.98□□□□□ -0.49
CPNE1-221ENST00000462352 ALOX15BO15296 676 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms