RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PCDH20Q8N6Y1 951 aaKnown RBP16.16■□□□□ 0.18
ERCC3-206ENST00000462306 NPWQ8N729 165 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 CHST14Q8NCH0 376 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 PIP4K2CQ8TBX8 421 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 PIGKQ92643 395 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 FOXJ1Q92949 421 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 ISG20Q96AZ6 181 aaKnown RBP16.16■□□□□ 0.18
ERCC3-206ENST00000462306 CELF6Q96J87 481 aaKnown RBP16.16■□□□□ 0.18
ERCC3-206ENST00000462306 CSPG4P5Q96PW8 444 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 SLC39A8Q9C0K1 460 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 BTBD1Q9H0C5 482 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 PCED1AQ9H1Q7 454 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 NEUROG2Q9H2A3 272 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 SGK2Q9HBY8 427 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 NCKAP1Q9Y2A7 1128 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.16■□□□□ 0.18
ERCC3-206ENST00000462306 NUMA1Q14980 2115 aa16.16■□□□□ 0.18
ERCC3-206ENST00000462306 GON4LQ3T8J9 2241 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 RNF103O00237 685 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 BUB1O43683 1085 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 RNASEH2AO75792 299 aaKnown RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 SEMA4FO95754 770 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 AMPD1P23109 780 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 IL4RP24394 825 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 CHRNA3P32297 505 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 CYLC1P35663 651 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 ARL4AP40617 200 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 ARHGAP25P42331 645 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 SFSWAPQ12872 951 aaKnown RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 MESDQ14696 234 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 CARD16Q5EG05 197 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 FAM46CQ5VWP2 391 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 RALGAPA1Q6GYQ0 2036 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 TCEAL6Q6IPX3 200 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 ZNF354CQ86Y25 554 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 PLPP6Q8IY26 295 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 TMIEQ8NEW7 156 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 GANCQ8TET4 914 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 TCEAL3Q969E4 200 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 CCDC114Q96M63 670 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 OMDQ99983 421 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 C6orf106Q9H6K1 298 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 ETNK2Q9NVF9 386 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 FZD4Q9ULV1 537 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 MFHAS1Q9Y4C4 1052 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 PCDHA13Q9Y5I0 950 aa16.15■□□□□ 0.18
ERCC3-206ENST00000462306 EPN1Q9Y6I3 576 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 ATXN2Q99700 1313 aaKnown RBP16.15■□□□□ 0.18
ERCC3-206ENST00000462306 CFAP54Q96N23 3096 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 TMEM110-MUSTN1A8MSY1 372 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 PATE3B3GLJ2 98 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 C10orf142B7Z368 130 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 PLK4O00444 970 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 NDUFA10O95299 355 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 CD48P09326 243 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 HOXD12P35452 270 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 DPP6P42658 865 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 PAPOLAP51003 745 aaKnown RBP16.14■□□□□ 0.17
ERCC3-206ENST00000462306 HADHBP55084 474 aaKnown RBP16.14■□□□□ 0.17
ERCC3-206ENST00000462306 CDH6P55285 790 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 INO80DQ53TQ3 878 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-206ENST00000462306 DCAF12L1Q5VU92 463 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 RAD9BQ6WBX8 426 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 TMEM139Q8IV31 216 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 TP53INP2Q8IXH6 220 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 LZTR1Q8N653 840 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 SPC24Q8NBT2 197 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 NETO2Q8NC67 525 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 DNASE2BQ8WZ79 361 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 VOPP1Q96AW1 172 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 PDFQ9HBH1 243 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 RCOR3Q9P2K3 495 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-206ENST00000462306 TFR2Q9UP52 801 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 WASF2Q9Y6W5 498 aa16.14■□□□□ 0.17
ERCC3-206ENST00000462306 ARHGAP42A6NI28 874 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 C1QTNF3-AMACRE9PGA6 284 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 J3KR12 359 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 FOXD2O60548 495 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-206ENST00000462306 PRAMEF11O60813 436 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 TMCC1O94876 653 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 GSRP00390 522 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 PRNPP04156 253 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 KRT7P08729 469 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 MAOBP27338 520 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 GJC1P36383 396 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 RECQLP46063 649 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-206ENST00000462306 DNA2P51530 1060 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 CCNHP51946 323 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-206ENST00000462306 LMNB2Q03252 620 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 MMRN1Q13201 1228 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 DPYSL3Q14195 570 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 KRT81Q14533 505 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 CYTH1Q15438 398 aa16.13■□□□□ 0.17
ERCC3-206ENST00000462306 SPA17Q15506 151 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms