RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 EBF2Q9HAK2 575 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 DYRK4Q9NR20 520 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 AASDHPPTQ9NRN7 309 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 AIPL1Q9NZN9 384 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 IL36AQ9UHA7 158 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ANKRD6Q9Y2G4 727 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 FCF1Q9Y324 198 aaKnown RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PCNX2A6NKB5 2137 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 DOCK9Q9BZ29 2069 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 WDFY3Q8IZQ1 3526 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3DA0A087WVF3 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3IA0A087WXS9 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3EA0A087X179 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3KA0A087X1G2 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3FA6NER0 549 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3LB9A6J9 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 VILLO15195 856 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 FLRT2O43155 660 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 LATO43561 262 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3HP0C7X1 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PSMA2P25787 234 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 EPHB2P29323 1055 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 MAT2AP31153 395 aaKnown RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 L1CAMP32004 1257 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 CTSKP43235 329 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 CCNHP51946 323 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 GEMIN4P57678 1058 aaKnown RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 FAM193AP78312 1265 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 FANCCQ00597 558 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 OGDHQ02218 1023 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 KLHL30Q0D2K2 578 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 MAMLD1Q13495 774 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 ZSCAN23Q3MJ62 389 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TDRD12Q587J7 1177 aaKnown RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3GQ6DHY5 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3CQ6IPX1 549 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 NAPEPLDQ6IQ20 393 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PLEKHA7Q6IQ23 1121 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 DPY19L3Q6ZPD9 716 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TRIM69Q86WT6 500 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 DNAAF5Q86Y56 855 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 TBC1D3Q8IZP1 549 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PYROXD2Q8N2H3 581 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 RTL3Q8N8U3 475 aaKnown RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 ARHGEF2Q92974 986 aaKnown RBP10.38□□□□□ -0.75
SF3A3-204ENST00000462258 ARRDC3Q96B67 414 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 SKA1Q96BD8 255 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PPP1R16AQ96I34 528 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 SERAC1Q96JX3 654 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 MAGEB5Q9BZ81 275 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 EDEM3Q9BZQ6 932 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PREBQ9HCU5 417 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 FZD10Q9ULW2 581 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 ACTL7AQ9Y615 435 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 WASF2Q9Y6W5 498 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 SPEGQ15772 3267 aa10.38□□□□□ -0.75
SF3A3-204ENST00000462258 COL5A1P20908 1838 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 CXorf51AA0A1B0GTR3 108 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 A0A1W2PQJ5 194 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 H0Y8X5 98 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 DDX3XO00571 662 aaKnown RBP eCLIP10.37□□□□□ -0.755e-24■■■□□ 15.2
SF3A3-204ENST00000462258 FGF10O15520 208 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 CREB3O43889 395 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 ZNF821O75541 412 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 LEFTY1O75610 366 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 WNT1P04628 370 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 GZMAP12544 262 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 CD38P28907 300 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 NUDT1P36639 197 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 PBX1P40424 430 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 DNA2P51530 1060 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 UBASH3AP57075 661 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 TAS2R38P59533 333 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 TPI1P60174 286 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 IL9RQ01113 521 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 SLC20A2Q08357 652 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 POLD3Q15054 466 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 ZNF423Q2M1K9 1284 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 SETMARQ53H47 684 aaPredicted RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 SLC45A4Q5BKX6 768 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 KCNT1Q5JUK3 1230 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 ZNF354CQ86Y25 554 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 TMIEQ8NEW7 156 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 SETD7Q8WTS6 366 aaKnown RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 TRIM11Q96F44 468 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 TM6SF2Q9BZW4 377 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 MAGEH1Q9H213 219 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 ZDHHC6Q9H6R6 413 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 CATSPERBQ9H7T0 1116 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 CNOT8Q9UFF9 292 aaKnown RBP10.37□□□□□ -0.75
SF3A3-204ENST00000462258 PCOLCE2Q9UKZ9 415 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 HPCAL4Q9UM19 191 aa10.37□□□□□ -0.75
SF3A3-204ENST00000462258 AP4E1Q9UPM8 1137 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms