RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ALPPL2P10696 532 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 RHOQP17081 205 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 TFE3P19532 575 aaPredicted RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 HNRNPA2B1P22626 353 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 EPHB2P29323 1055 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CTSKP43235 329 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 PTPN9P43378 593 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 SERPINH1P50454 418 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 NEK3P51956 506 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 AIF1P55008 147 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 JAM2P57087 298 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 RPS21P63220 83 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 FAM193AP78312 1265 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 DAB2P98082 770 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 ASIC2Q16515 512 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CLEC16AQ2KHT3 1053 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CCDC14Q49A88 953 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 ANO6Q4KMQ2 910 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 RBM43Q6ZSC3 357 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 ZSCAN30Q86W11 494 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 TRIM69Q86WT6 500 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 PHF13Q86YI8 300 aaPredicted RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 C3orf20Q8ND61 904 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 OR7D4Q8NG98 312 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 C1orf216Q8TAB5 229 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CNDP2Q96KP4 475 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 ERGIC2Q96RQ1 377 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 C1QTNF7Q9BXJ2 289 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CALN1Q9BXU9 219 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 OSBPL2Q9H1P3 480 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 MAGEH1Q9H213 219 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 CCDC86Q9H6F5 360 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 PARVAQ9NVD7 372 aa9.05□□□□□ -0.96
LDB1-203ENST00000461873 HECAQ9UBI9 543 aaPredicted RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 NOCTQ9UK39 431 aaKnown RBP9.05□□□□□ -0.96
LDB1-203ENST00000461873 IGLV3-10A0A075B6K4 115 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 NEMP2A6NFY4 417 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 C2CD4BA6NLJ0 364 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 H3BM21 787 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 KRIT1O00522 736 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ENC1O14682 589 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 LEFTY1O75610 366 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 IGSF6O95976 241 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 TOP3BO95985 862 aaKnown RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 MT-CO1P00395 513 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 TPM3P06753 285 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 THEGLP0DJG4 465 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 UNGP13051 313 aaPredicted RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 JUPP14923 745 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 RFC1P35251 1148 aaPredicted RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 DRD3P35462 400 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 IRAK1P51617 712 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 NXPH1P58417 271 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 PPP2CBP62714 309 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 PPP2CAP67775 309 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ZSCAN23Q3MJ62 389 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 PRAMEF14Q5SWL7 426 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 AGBL4Q5VU57 503 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 SFMBT2Q5VUG0 894 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ACAD10Q6JQN1 1059 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 KIAA1161Q6NSJ0 714 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 DPY19L3Q6ZPD9 716 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 RAB44Q7Z6P3 723 aaPredicted RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 HORMAD1Q86X24 394 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 GATAD2AQ86YP4 633 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 DCP2Q8IU60 420 aaKnown RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 EID2Q8N6I1 236 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 OR2A12Q8NGT7 310 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 CASKIN2Q8WXE0 1202 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 KLK6Q92876 244 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 RAB7BQ96AH8 199 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ALG14Q96F25 216 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 LRIG1Q96JA1 1093 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 MYOCQ99972 504 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 HDAC8Q9BY41 377 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 TM6SF2Q9BZW4 377 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 ERVMER34-1Q9H9K5 563 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 MRPL47Q9HD33 250 aaKnown RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 TMPRSS4Q9NRS4 437 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 SARDHQ9UL12 918 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 SIK3Q9Y2K2 1263 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 FCF1Q9Y324 198 aaKnown RBP9.04□□□□□ -0.96
LDB1-203ENST00000461873 OR51B4Q9Y5P0 310 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
LDB1-203ENST00000461873 DOCK4Q8N1I0 1966 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 CXorf51AA0A1B0GTR3 108 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 SYCE3A1L190 88 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 LRRC10BA6NIK2 292 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 A6NNZ2 444 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 K7ERQ8 282 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 FPGTO14772 594 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 FGF10O15520 208 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 SMAD6O43541 496 aaKnown RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 LATO43561 262 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms