RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PEPDP12955 493 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ST6GAL1P15907 406 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ALOX12P18054 663 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 YWHAQP27348 245 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CERS1P27544 350 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 AVPR2P30518 371 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 DRG2P55039 364 aaKnown RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 UFM1P61960 85 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ZNF268Q14587 947 aaPredicted RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TBCEQ15813 527 aaPredicted RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 RPE65Q16518 533 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 AP5B1Q2VPB7 878 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 EDRF1Q3B7T1 1238 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TMEM268Q5VZI3 342 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 HAUS3Q68CZ6 603 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 KLHL24Q6TFL4 600 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 OLFML1Q6UWY5 402 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TFAP2DQ7Z6R9 452 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CPLX4Q7Z7G2 160 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TADA2BQ86TJ2 420 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CHSY1Q86X52 802 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 NME8Q8N427 588 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CPXM2Q8N436 756 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ANKRD52Q8NB46 1076 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 SETD9Q8NE22 299 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 DNAAF1Q8NEP3 725 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 SEMA6DQ8NFY4 1073 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 FAM110DQ8TAY7 271 aaPredicted RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 C2CD4CQ8TF44 421 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 HASPINQ8TF76 798 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 TMEM170AQ8WVE7 144 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 FAR1Q8WVX9 515 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 POMGNT1Q8WZA1 660 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 HSPH1Q92598 858 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 NUDT16L1Q9BRJ7 211 aaKnown RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CCDC68Q9H2F9 335 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 ACTR5Q9H9F9 607 aaPredicted RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 BRF2Q9HAW0 419 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 PAPOLBQ9NRJ5 636 aaKnown RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 CAMK2AQ9UQM7 478 aa3.26□□□□□ -1.89
HDAC6-212ENST00000461608 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 FNDC1Q4ZHG4 1894 aaPredicted RBP3.26□□□□□ -1.89
HDAC6-212ENST00000461608 NPIPB15A6NHN6 443 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SMIM22K7EJ46 135 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 RNMTO43148 476 aaKnown RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TIMM44O43615 452 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 CEP104O60308 925 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TSPAN9O75954 239 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 NFATC1O95644 943 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 DDAH2O95865 285 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 UBL4AP11441 157 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 PCNAP12004 261 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ZNF8P17098 575 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 PTPN2P17706 415 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 FMO4P31512 558 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 CPOXP36551 454 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 GPR12P47775 334 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 CTCFP49711 727 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 CLCNKBP51801 687 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 RPS13P62277 151 aaKnown RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 CCNG2Q16589 344 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 MEA1Q16626 185 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SLC9C1Q4G0N8 1177 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ALG10Q5BKT4 473 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ALG10BQ5I7T1 473 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 KIAA1755Q5JYT7 1200 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SH2D4BQ5SQS7 431 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TTC39AQ5SRH9 613 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 GPATCH4Q5T3I0 446 aaKnown RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SERTAD4-AS1Q5TG53 156 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ATG9BQ674R7 924 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TMEM154Q6P9G4 183 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SARM1Q6SZW1 724 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 C17orf99Q6UX52 265 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 RNF144BQ7Z419 303 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 PXKQ7Z7A4 578 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 FAM160B2Q86V87 743 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 WDR5BQ86VZ2 330 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TMC8Q8IU68 726 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 C8orf58Q8NAV2 365 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 SMARCE1Q969G3 411 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 OTULINQ96BN8 352 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 H2AFJQ9BTM1 129 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 EFHD1Q9BUP0 239 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 PRKRIP1Q9H875 184 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ATP8A2Q9NTI2 1148 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.25□□□□□ -1.89
HDAC6-212ENST00000461608 NCKIPSDQ9NZQ3 722 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 KIAA1456Q9P272 454 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 ICKQ9UPZ9 632 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 NAALADL1Q9UQQ1 740 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 TTLL3Q9Y4R7 772 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 LYVE1Q9Y5Y7 322 aa3.25□□□□□ -1.89
HDAC6-212ENST00000461608 A0A1W2PQM1 296 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 C17orf100A8MU93 164 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TAF4O00268 1085 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CBX6O95503 412 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 IL1AP01583 271 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 PRKCGP05129 697 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms