RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 SMG5Q9UPR3 1016 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 MACROD2A1Z1Q3 448 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PRR23AA6NEV1 266 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 MFSD11O43934 449 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 TMCC1O94876 653 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 KRT1P04264 644 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CTSLP07711 333 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 SERPINB6P35237 376 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PLA2G5P39877 138 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CDKN2BP42772 138 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PEX5P50542 639 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 IL10RBQ08334 325 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 GALNT2Q10471 571 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 SIM2Q14190 667 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CYTH1Q15438 398 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CST6Q15828 149 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PLK5Q496M5 336 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 ACCSLQ4AC99 568 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 MFSD7Q6UXD7 560 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 KBTBD6Q86V97 674 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CACUL1Q86Y37 369 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 KIAA1524Q8TCG1 905 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 TSGA10Q9BZW7 698 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PABPC3Q9H361 631 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 SARDHQ9UL12 918 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 CAPN6Q9Y6Q1 641 aa12.35□□□□□ -0.43
ERGIC3-211ENST00000461043 RIF1Q5UIP0 2472 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 RNF103O00237 685 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 DFFAO00273 331 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 MID1O15344 667 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 MAFKO60675 156 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 ADH1BP00325 375 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 GSRP00390 522 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CCDC175P0C221 793 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CTNNA2P26232 953 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 DRD3P35462 400 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 GBE1Q04446 702 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CARD16Q5EG05 197 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 PMS2CLQ68D20 193 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 MMAAQ8IVH4 418 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 AADATQ8N5Z0 425 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 TMIEQ8NEW7 156 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 NKD2Q969F2 451 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 SPACA7Q96KW9 195 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 ZNF599Q96NL3 588 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 LHX3Q9UBR4 397 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 UBA2Q9UBT2 640 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 SERGEFQ9UGK8 458 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 CYP8B1Q9UNU6 501 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
ERGIC3-211ENST00000461043 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.43
ERGIC3-211ENST00000461043 PALMO75781 387 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 IL1BP01584 269 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 DNTTP04053 509 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 ACADMP11310 421 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 TNNT1P13805 278 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 C5AR1P21730 350 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 CD6P30203 668 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 OXTRP30559 389 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 CHRNA3P32297 505 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 SLC8A1P32418 973 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 PSMD8P48556 350 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 CCNHP51946 323 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 METAP1P53582 386 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 NAP1L1P55209 391 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 LAIR1Q6GTX8 287 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 SLC36A4Q6YBV0 504 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 SPOCD1Q6ZMY3 1216 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 CEP68Q76N32 757 aa12.33□□□□□ -0.44
ERGIC3-211ENST00000461043 ASCL5Q7RTU5 278 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms