RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 CSF2RAP15509 400 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ALOX15P16050 662 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TNFSF4P23510 183 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ADSSP30520 456 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SLC7A1P30825 629 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TNFSF9P41273 254 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 MATR3P43243 847 aaKnown RBP eCLIP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 LIG4P49917 911 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 OSTNP61366 133 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 CTAG1AP78358 180 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 GTF2BQ00403 316 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 DUSP2Q05923 314 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 GABPB1Q06547 395 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PRPF4BQ13523 1007 aaKnown RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 RAPGEF1Q13905 1077 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TFDP1Q14186 410 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF568Q3ZCX4 644 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ZCWPW2Q504Y3 356 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SPDYCQ5MJ68 293 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ANKRD40Q6AI12 368 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TTI2Q6NXR4 508 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 USP30Q70CQ3 517 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TMCO2Q7Z6W1 182 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF410Q86VK4 478 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PLXDC1Q8IUK5 500 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 DHX40Q8IX18 779 aaKnown RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SYCP3Q8IZU3 236 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ARL10Q8N8L6 244 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 RNF152Q8N8N0 203 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 DCBLD1Q8N8Z6 715 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 DRAXINQ8NBI3 349 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 CCDC26Q8TAB7 109 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 HDAC7Q8WUI4 952 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SH3KBP1Q96B97 665 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PLEKHG4BQ96PX9 1271 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ACCSQ96QU6 501 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SPATA25Q9BR10 227 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 APOL6Q9BWW8 343 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 GCOM2Q9BZD3 368 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 CDT1Q9H211 546 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 TSPY26PQ9H489 355 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 NXF3Q9H4D5 531 aaKnown RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PDZD7Q9H5P4 517 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 BARX1Q9HBU1 254 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ERVK-5Q9HDB9 667 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 SAMSN1Q9NSI8 373 aaKnown RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PIH1D1Q9NWS0 290 aaKnown RBP5.24□□□□□ -1.57
SF3A3-202ENST00000460925 RMND1Q9NWS8 449 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 CACNG4Q9UBN1 327 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF69Q9UC07 566 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 GTF3C4Q9UKN8 822 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ZDHHC8Q9ULC8 765 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 PADI3Q9ULW8 664 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 ST3GAL5Q9UNP4 418 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 NLRC5Q86WI3 1866 aa5.24□□□□□ -1.57
SF3A3-202ENST00000460925 CNTNAP2Q9UHC6 1331 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TMCO5BA8MYB1 307 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 KPNA5O15131 536 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ZSCAN9O15535 394 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 E2F6O75461 281 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 FGF18O76093 207 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 IL18RAPO95256 599 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 HNRNPCP07910 306 aaKnown RBP eCLIP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF888P0CJ79 500 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ATP1A3P13637 1013 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TSHRP16473 764 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ATF7P17544 494 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 FPR1P21462 350 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 NR2F2P24468 414 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CCNE1P24864 410 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 HOXA11P31270 313 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ACOT2P49753 483 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 GATMP50440 423 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CRYBB1P53674 252 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 EPHB4P54760 987 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 SPAG1Q07617 926 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 COX10Q12887 443 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 BFSP2Q13515 415 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 DAG1Q14118 895 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 IQCB1Q15051 598 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 MAPK6Q16659 721 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 KNOP1Q1ED39 458 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 BMT2Q1RMZ1 405 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PRAMEF14Q5SWL7 426 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 UBXN11Q5T124 520 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ATF7IP2Q5U623 682 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 FAAH2Q6GMR7 532 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TWF2Q6IBS0 349 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ARMCX5Q6P1M9 558 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PLBD1Q6P4A8 553 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CNKSR3Q6P9H4 555 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CYP26C1Q6V0L0 522 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 LRRC55Q6ZSA7 311 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CBWD2Q8IUF1 395 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TMEM151BQ8IW70 566 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 THNSL1Q8IYQ7 743 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 GUF1Q8N442 669 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms