RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FGF14Q92915 247 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 SH3KBP1Q96B97 665 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 TMA16Q96EY4 203 aaKnown RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 HMCESQ96FZ2 354 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 ZNF419Q96HQ0 510 aaPredicted RBP10.55□□□□□ -0.72
USP39-210ENST00000459775 OLFM3Q96PB7 478 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 DPH5Q9H2P9 285 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 ENAMQ9NRM1 1142 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 SEPT10Q9P0V9 454 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 TRIOO75962 3097 aa10.55□□□□□ -0.72
USP39-210ENST00000459775 DENND4CQ5VZ89 1909 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 CCDC188H7C350 402 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 J3KR12 359 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 SGK1O00141 431 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 TCEA3O75764 348 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 ARSAP15289 507 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 RHOQP17081 205 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 TGM2P21980 687 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.725e-6■■■■■ 34.8
USP39-210ENST00000459775 CHRNA3P32297 505 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 NRG1Q02297 640 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 GUCY2DQ02846 1103 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 AP1B1Q10567 949 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 SMAD2Q15796 467 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 NAIF1Q69YI7 327 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 TTC19Q6DKK2 380 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 NEK10Q6ZWH5 1172 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 GSTA5Q7RTV2 222 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 JAMLQ86YT9 394 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 NAT16Q8N8M0 369 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 OR7D4Q8NG98 312 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 GSDMBQ8TAX9 411 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 USP33Q8TEY7 942 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 ANKRD49Q8WVL7 239 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 SMARCD2Q92925 531 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 ARNT2Q9HBZ2 717 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 STOML2Q9UJZ1 356 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 CDH7Q9ULB5 785 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 A0A0B4J203 849 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 ZNF487B1APH4 448 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 GFRA2O00451 464 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 MCF2LO15068 1137 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 KCNN4O15554 427 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 MZF1P28698 734 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 WEE1P30291 646 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 PAPOLAP51003 745 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 ITIH3Q06033 890 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 MESP2Q0VG99 397 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 LY6G5CQ5SRR4 150 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 FIP1L1Q6UN15 594 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 ADGRG2Q8IZP9 1017 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 CCDC110Q8TBZ0 833 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 CAPS2Q9BXY5 557 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 CATSPERBQ9H7T0 1116 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 TMEM248Q9NWD8 314 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 PPARGC1AQ9UBK2 798 aaKnown RBP10.54□□□□□ -0.72
USP39-210ENST00000459775 PCYOX1Q9UHG3 505 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 SNX24Q9Y343 169 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
USP39-210ENST00000459775 LINC00854A0A1B0GVQ3 168 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 E2F8A0AVK6 867 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 ANTXRLA6NF34 631 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 RASA4BC9J798 803 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 NEDD8-MDP1E9PL57 170 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 RASA4O43374 803 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 LAMP2P13473 410 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 HOXD9P28356 352 aaPredicted RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 USP4Q13107 963 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 RBBP5Q15291 538 aaKnown RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 CNGA3Q16281 694 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 DBN1Q16643 649 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 ANO4Q32M45 955 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 CXorf57Q6NSI4 855 aaKnown RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 RHBDF2Q6PJF5 856 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 VITQ6UXI7 678 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 ZNF354CQ86Y25 554 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 CELF5Q8N6W0 485 aaKnown RBP10.53□□□□□ -0.72
USP39-210ENST00000459775 FAM76AQ8TAV0 307 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 MAIP1Q8WWC4 291 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 EDAQ92838 391 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 AZIN2Q96A70 460 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 SH3GL1Q99961 368 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 SPON2Q9BUD6 331 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 EPB41L5Q9HCM4 733 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms