RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 TGM2P21980 687 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 UBA1P22314 1058 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 ERCC5P28715 1186 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SSTR2P30874 369 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MAP2K2P36507 400 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 IGHMBP2P38935 993 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 STAT6P42226 847 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC11A2P49281 568 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 AARSP49588 968 aaKnown RBP eCLIP0.12□□□□□ -2.396e-43■■□□□ 12.8
SNORD42B-201ENST00000458893 AGTR2P50052 363 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 METAP2P50579 478 aaKnown RBP eCLIP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SNRPD1P62314 119 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KCNJ10P78508 379 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KIF23Q02241 960 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 GAB1Q13480 694 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MYBPC2Q14324 1141 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 BMS1Q14692 1282 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MPEG1Q2M385 716 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 TUBB8Q3ZCM7 444 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KHDC1LQ5JSQ8 128 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 LMBRD2Q68DH5 695 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 VITQ6UXI7 678 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 GPRIN3Q6ZVF9 776 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KCTD8Q6ZWB6 473 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 HEATR3Q7Z4Q2 680 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CCDC25Q86WR0 208 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 DDX42Q86XP3 938 aaKnown RBP eCLIP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CMIPQ8IY22 773 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MPP5Q8N3R9 675 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 ZNF561Q8N587 486 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC15A4Q8N697 577 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 DDX51Q8N8A6 666 aaKnown RBP eCLIP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SRFBP1Q8NEF9 429 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KLHDC9Q8NEP7 349 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CMASQ8NFW8 434 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 OR52N4Q8NGI2 321 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 TMEM163Q8TC26 289 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MRGPRDQ8TDS7 321 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 NSUN6Q8TEA1 469 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 PHF10Q8WUB8 498 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 ASB12Q8WXK4 309 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 PRR11Q96HE9 360 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 FAM167AQ96KS9 214 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 HIST1H2AAQ96QV6 131 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 PPP1R9BQ96SB3 815 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SRPK1Q96SB4 655 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 DMRTA2Q96SC8 542 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 TTC1Q99614 292 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CDX2Q99626 313 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 BARD1Q99728 777 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SYT15Q9BQS2 421 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 LRRC61Q9BV99 259 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 TRIM5Q9C035 493 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 MS4A7Q9GZW8 240 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 WNT5BQ9H1J7 359 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 TMX1Q9H3N1 280 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 KLHL31Q9H511 634 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 IFT22Q9H7X7 185 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CLK4Q9HAZ1 481 aaKnown RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CTSZQ9UBR2 303 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 EPHA6Q9UF33 1036 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 FBXO40Q9UH90 709 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 RIMKLBQ9ULI2 386 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC45A1Q9Y2W3 748 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 PCDHB2Q9Y5E7 798 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 CDY1Q9Y6F8 540 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 ASTN2O75129 1339 aaPredicted RBP0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 WASHC2AQ641Q2 1341 aa0.12□□□□□ -2.39
SNORD42B-201ENST00000458893 GREB1LQ9C091 1923 aaPredicted RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 A0A1W2PP11 408 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 FAM227AF5H4B4 570 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC16A6O15403 523 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 HTRA2O43464 458 aaPredicted RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 AP1G1O43747 822 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 NDUFS2O75306 463 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 PIAS2O75928 621 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 IGHV3-13P01766 116 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 C9P02748 559 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 PROS1P07225 676 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 MMP3P08254 477 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 PARP1P09874 1014 aaKnown RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 LINC00271P0C7V0 271 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 FDPSP14324 419 aaKnown RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 GP9P14770 177 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 MMP8P22894 467 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 KLRC2P26717 231 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 HOXC8P31273 242 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 STAT1P42224 750 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC6A12P48065 614 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 EFNA5P52803 228 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 ITGA8P53708 1063 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 RPP30P78346 268 aaKnown RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 NDPQ00604 133 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 ELAVL2Q12926 359 aaKnown RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 STK3Q13188 491 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 CTTNQ14247 550 aaKnown RBP0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 STAT4Q14765 748 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 CLCA4Q14CN2 919 aa0.11□□□□□ -2.39
SNORD42B-201ENST00000458893 C3orf36Q3SXR2 165 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms