RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 TRGV11A0A075B6L2 103 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 ISM1B1AKI9 464 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 HAS3O00219 553 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 YY2O15391 372 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 DUSP11O75319 330 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 SLC43A1O75387 559 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 HAUS5O94927 633 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 PGK1P00558 417 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 POMCP01189 267 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 GJB1P08034 283 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 PRR35P0CG20 571 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 TXNP10599 105 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 TGFB3P10600 412 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 UBA1P22314 1058 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CDC25AP30304 524 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CCKBRP32239 447 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 KRT2P35908 639 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 HSPA7P48741 367 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CDK7P50613 346 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 MAPK10P53779 464 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 NOMO3P69849 1222 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 BEX3Q00994 111 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 SLC10A2Q12908 348 aaPredicted RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CTBP1Q13363 440 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 GPNMBQ14956 572 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 UBXN2BQ14CS0 331 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 ELF2Q15723 593 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CELF3Q5SZQ8 465 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 KAZNQ674X7 775 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 CPLX2Q6PUV4 134 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF365Q70YC5 407 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 NIPA1Q7RTP0 329 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 AMIGO2Q86SJ2 522 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 PLA2G4DQ86XP0 818 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 NLGN4YQ8NFZ3 816 aaPredicted RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 MSLNLQ96KJ4 702 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 DEFB118Q96PH6 123 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 USP28Q96RU2 1077 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 HSD17B14Q9BPX1 270 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 C16orf70Q9BSU1 422 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 WACQ9BTA9 647 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 TTLL2Q9BWV7 592 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 DPH1Q9BZG8 443 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 UNKQ9C0B0 810 aaKnown RBP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBDP1-202ENST00000457888 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 ARFGAP3Q9NP61 516 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 FAM30AQ9NZY2 134 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 NRBP1Q9UHY1 535 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 RCOR1Q9UKL0 485 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 TBC1D30Q9Y2I9 924 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 REV3LO60673 3130 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 VCANP13611 3396 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 SCN10AQ9Y5Y9 1956 aa4.29□□□□□ -1.72
UBDP1-202ENST00000457888 EYSQ5T1H1 3165 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 TET1Q8NFU7 2136 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 A0A1W2PPC4 97 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 CDHR4A6H8M9 788 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 PP2D1A8MPX8 630 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 IPO5O00410 1097 aaKnown RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 BTN3A1O00481 513 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MPPED1O15442 326 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 DNAJB5O75953 348 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 SLITRK3O94933 977 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 PRSS23O95084 383 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 GGPS1O95749 300 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 RPL17P18621 184 aaKnown RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 ITGB8P26012 769 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 CCND2P30279 289 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 GRIA3P42263 894 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 PSMC6P62333 389 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 TUBA4AP68366 448 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 TNFAIP2Q03169 654 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 GALNT1Q10472 559 aaPredicted RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 TRAF1Q13077 416 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 KLF9Q13886 244 aaPredicted RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 RAPGEF1Q13905 1077 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 NONOQ15233 471 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 UGCGQ16739 394 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 LETM2Q2VYF4 491 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 SLC9C1Q4G0N8 1177 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MARCH8Q5T0T0 291 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 RRAGBQ5VZM2 374 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MFSD14CQ5VZR4 134 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MOXD1Q6UVY6 613 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 NEK8Q86SG6 692 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MYLK4Q86YV6 388 aaPredicted RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 HSCBQ8IWL3 235 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 MYCT1Q8N699 235 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 ATP11CQ8NB49 1132 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 LINC00301Q8NCQ3 95 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 CCDC148Q8NFR7 591 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 BICD2Q8TD16 824 aa4.28□□□□□ -1.72
UBDP1-202ENST00000457888 U2AF1L4Q8WU68 220 aaKnown RBP4.28□□□□□ -1.72
UBDP1-202ENST00000457888 KBTBD7Q8WVZ9 684 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms