RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ACCSLQ4AC99 568 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 PIK3R6Q5UE93 754 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 ATG14Q6ZNE5 492 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 ZNF683Q8IZ20 524 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 TEX9Q8N6V9 391 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 CFAP61Q8NHU2 1237 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 RILPQ96NA2 401 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC43-202ENST00000457422 DNAJC28Q9NX36 388 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 GMIPQ9P107 970 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 TAGLN3Q9UI15 199 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 ANKRD6Q9Y2G4 727 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 PCDHB12Q9Y5F1 795 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 BRCA2P51587 3418 aa16.94■□□□□ 0.3
CCDC43-202ENST00000457422 COL6A1P12109 1028 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 DNAJB1P25685 340 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 ARRB2P32121 409 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 POLD2P49005 469 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 PAPOLAP51003 745 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 USP46P62068 366 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 ITGA9Q13797 1035 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 UGP2Q16851 508 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 VARS2Q5ST30 1063 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 UMODL1-AS1Q8N2C9 162 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 SLC43A3Q8NBI5 491 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 ACVR1CQ8NER5 493 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 PPHLN1Q8NEY8 458 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 FTHL17Q9BXU8 183 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 PRDM5Q9NQX1 630 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 RBM22Q9NW64 420 aaKnown RBP eCLIP16.93■□□□□ 0.31e-7■■■■■ 41.1
CCDC43-202ENST00000457422 MID2Q9UJV3 735 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 PCDHB5Q9Y5E4 795 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 TMEM114B3SHH9 223 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 AOC2O75106 756 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 SIN3BO75182 1162 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 H2AFYO75367 372 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 LMNAP02545 664 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 APOA4P06727 396 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 MYL4P12829 197 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 AOC1P19801 751 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 NDST2P52849 883 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 GRM3Q14832 879 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 RABGAP1LQ5R372 815 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 RANBP10Q6VN20 620 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 TMPRSS6Q8IU80 811 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 TTC9BQ8N6N2 239 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 MCUR1Q96AQ8 359 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 FAM193BQ96PV7 902 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 NOL6Q9H6R4 1146 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 NMRAL1Q9HBL8 299 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 NKX1-2Q9UD57 310 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 SRRDQ9UH36 339 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 IPO11Q9UI26 975 aaKnown RBP16.93■□□□□ 0.3
CCDC43-202ENST00000457422 TCAF1Q9Y4C2 921 aa16.93■□□□□ 0.3
CCDC43-202ENST00000457422 ZNF195O14628 629 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 PEX11BO96011 259 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 ENO1P06733 434 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TPBGLP0DKB5 382 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 RHOQP17081 205 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 ARCN1P48444 511 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TBX4P57082 545 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 POU6F1Q14863 301 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 MIA3Q5JRA6 1907 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 MAVSQ7Z434 540 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 RDH11Q8TC12 318 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 SREK1Q8WXA9 508 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 MRGPRX2Q96LB1 330 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 NUDCD1Q96RS6 583 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 C1QTNF1Q9BXJ1 281 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TMEM161AQ9NX61 479 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 DONSONQ9NYP3 566 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 MAGEC1O60732 1142 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TADA2AO75478 443 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 GNAZP19086 355 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 ALDH18A1P54886 795 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 HNRNPDQ14103 355 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TLDC1Q6P9B6 456 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 RFWD3Q6PCD5 774 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 GPR152Q8TDT2 470 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 FSD1LQ9BXM9 530 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 SLC25A51Q9H1U9 297 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 C1orf21Q9H246 121 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 ARNT2Q9HBZ2 717 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TREX1Q9NSU2 369 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 TMEM248Q9NWD8 314 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 CLIC5Q9NZA1 410 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 SLC39A10Q9ULF5 831 aa16.92■□□□□ 0.3
CCDC43-202ENST00000457422 APOBEC2Q9Y235 224 aaKnown RBP16.92■□□□□ 0.3
CCDC43-202ENST00000457422 GREB1Q4ZG55 1949 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 IGLV3-10A0A075B6K4 115 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 SPECC1L-ADORA2AF8WAN1 911 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 PMPCBO75439 489 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 AHSGP02765 367 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 COL6A2P12110 1019 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms