RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 C9orf57Q5W0N0 161 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 GUSBP11Q6P575 273 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 CRTC1Q6UUV9 634 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 TPGS1Q6ZTW0 290 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 EFL1Q7Z2Z2 1120 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 DSG4Q86SJ6 1040 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 IQCHQ86VS3 1027 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 ZNF276Q8N554 614 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 CCDC148Q8NFR7 591 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 WDR48Q8TAF3 677 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 APOBEC4Q8WW27 367 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 HAS1Q92839 578 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 SPATA17Q96L03 361 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 PYM1Q9BRP8 204 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 TARS2Q9BW92 718 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 TTLL2Q9BWV7 592 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 MRPL4Q9BYD3 311 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 PPP4R2Q9NY27 417 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 EHD2Q9NZN4 543 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 NCKAP1Q9Y2A7 1128 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 SLC27A6Q9Y2P4 619 aa6.52□□□□□ -1.37
COMMD3-204ENST00000456711 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
COMMD3-204ENST00000456711 MN1Q10571 1320 aaPredicted RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 SCN1AP35498 2009 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 PRAMEF33A0A0G2JMD5 474 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CPED1A4D0V7 1026 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 EME2A4GXA9 379 aaPredicted RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 LRRC72A6NJI9 287 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 K7EM74 188 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 ZBTB43O43298 467 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 PRAMEF10O60809 474 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 JMJD7P0C870 316 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CD1EP15812 388 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CD82P27701 267 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 MAGEA11P43364 429 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 LEPRP48357 1165 aaKnown RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CCR5P51681 352 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 MFAP3P55082 362 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 HDAC4P56524 1084 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 YBX1P67809 324 aaKnown RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 OVGP1Q12889 678 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 SPIDRQ14159 915 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CDKN3Q16667 212 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 ANKRD45Q5TZF3 282 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 SPATA1Q5VX52 437 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 NAPEPLDQ6IQ20 393 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 TCTN3Q6NUS6 607 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 NXPE4Q6UWF7 544 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 DENND5BQ6ZUT9 1274 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 USP30Q70CQ3 517 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 TAOK1Q7L7X3 1001 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 HDXQ7Z353 690 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 XYLT1Q86Y38 959 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 SPATA2LQ8IUW3 424 aaPredicted RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 OR2T34Q8NGX1 318 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 WBP2Q969T9 261 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 FUBP3Q96I24 572 aaKnown RBP eCLIP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 ZBTB45Q96K62 511 aaPredicted RBP6.51□□□□□ -1.37
COMMD3-204ENST00000456711 IFT74Q96LB3 600 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CEP295NLQ96MC4 621 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 PKMYT1Q99640 499 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 ACBD6Q9BR61 282 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 LRRC2Q9BYS8 371 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CCSER1Q9C0I3 900 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 EPB41L5Q9HCM4 733 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 PREBQ9HCU5 417 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 ELOVL2Q9NXB9 296 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 NCKIPSDQ9NZQ3 722 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 PISDQ9UG56 409 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 GTF3C4Q9UKN8 822 aa6.51□□□□□ -1.37
COMMD3-204ENST00000456711 CROCCQ5TZA2 2017 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 TACC2O95359 2948 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 TDRD6O60522 2096 aaKnown RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 NEMP2A6NFY4 417 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 TMEM200CA6NKL6 621 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 ZNF891A8MT65 544 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 TMX2-CTNND1H3BSU7 103 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 SCAMP1O15126 338 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 CASC3O15234 703 aaKnown RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 COCHO43405 550 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 PIAS2O75928 621 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 CD99P14209 185 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 LIFP15018 202 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 PTGER4P35408 488 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 EIF4HQ15056 248 aaKnown RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 CRB2Q5IJ48 1285 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 ASB18Q6ZVZ8 466 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 HTR3DQ70Z44 454 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 TMPRSS9Q7Z410 1059 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 CCDC83Q8IWF9 413 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 RBBP8NLQ8NC74 664 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 GANCQ8TET4 914 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 JPH3Q8WXH2 748 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-204ENST00000456711 GOLGA1Q92805 767 aa6.5□□□□□ -1.37
COMMD3-204ENST00000456711 SLC29A3Q9BZD2 475 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms