RNA–Protein interactions for RNA: ENST00000455691.2

VPS25P1-201, Transcript of VPS25 pseudogene 1, humanhuman

BASIC

Gene VPS25P1, Length 508 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25P1-201ENST00000455691 SEMA4GQ9NTN9 838 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 ETNK2Q9NVF9 386 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 SPATA6Q9NWH7 488 aaPredicted RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 HCFC1R1Q9NWW0 138 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 CFAP97Q9P2B7 532 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 KLHL8Q9P2G9 620 aaPredicted RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 XPO7Q9UIA9 1087 aaKnown RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 TRHDEQ9UKU6 1024 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 ANGPTL2Q9UKU9 493 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 AGO1Q9UL18 857 aaKnown RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 ATP8A1Q9Y2Q0 1164 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 NEU2Q9Y3R4 380 aa6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 ZFP37Q9Y6Q3 630 aaPredicted RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 ASCC3Q8N3C0 2202 aaKnown RBP6.48□□□□□ -1.37
VPS25P1-201ENST00000455691 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 C5orf60A6NFR6 353 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 GOLGA6L10A6NI86 522 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RASA4BC9J798 803 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 K7ESF4 209 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RNF103O00237 685 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 LEFTY2O00292 366 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TRDMT1O14717 391 aaKnown RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SLC9A3R1O14745 358 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MATN3O15232 486 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RASA4O43374 803 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 OPA1O60313 960 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 OPHN1O60890 802 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RAMP2O60895 175 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TBL1XO60907 577 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RETP07949 1114 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RHOCP08134 193 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 POU2F2P09086 479 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 C1QTNF9P0C862 333 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CCNB1P14635 433 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FSHRP23945 695 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RPL22P35268 128 aaKnown RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ETFBP38117 255 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 GARSP41250 739 aaKnown RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MAPKAPK2P49137 400 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RENBPP51606 427 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 LIMK1P53667 647 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PMS2P54278 862 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 GDF10P55107 478 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ARL4CP56559 192 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FAM193AP78312 1265 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SLC7A9P82251 487 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ZNF33AQ06730 810 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PPIDQ08752 370 aaKnown RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 IFFO1Q0D2I5 559 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MORF4L2Q15014 288 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TRADDQ15628 312 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CSRP2Q16527 193 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MPPE1Q53F39 396 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SLC44A4Q53GD3 710 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ANKRD20A2Q5SQ80 823 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 BEND6Q5SZJ8 279 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ANKRD20A1Q5TYW2 823 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ANKRD20A3Q5VUR7 823 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ALS2CLQ60I27 953 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RFWD3Q6PCD5 774 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 HTR3DQ70Z44 454 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CENPUQ71F23 418 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 GAREM2Q75VX8 874 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PRUNE1Q86TP1 453 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TMC8Q8IU68 726 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 NPAS3Q8IXF0 933 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PDIK1LQ8N165 341 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 NETO2Q8NC67 525 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 HJURPQ8NCD3 748 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 ITFG1Q8TB96 612 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CCDC110Q8TBZ0 833 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FBXO25Q8TCJ0 367 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SEC14L1Q92503 715 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CAVIN3Q969G5 261 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 IGSF8Q969P0 613 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 EXOC4Q96A65 974 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 COL26A1Q96A83 441 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 HDAC11Q96DB2 347 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 P2RY11Q96G91 374 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PPP1R2P1Q96PQ5 205 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 QKIQ96PU8 341 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SLC46A2Q9BY10 475 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 LRRC3Q9BY71 257 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FAM126AQ9BYI3 521 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 FRMD8Q9BZ67 464 aaPredicted RBP6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 PLA2G2FQ9BZM2 168 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 SLC39A8Q9C0K1 460 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MAGEH1Q9H213 219 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 IL21Q9HBE4 155 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 USP29Q9HBJ7 922 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TDP1Q9NUW8 608 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TMEM248Q9NWD8 314 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 C2orf42Q9NWW7 574 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TBC1D14Q9P2M4 693 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 RSPH14Q9UHP6 348 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 CDH7Q9ULB5 785 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 MFHAS1Q9Y4C4 1052 aa6.47□□□□□ -1.37
VPS25P1-201ENST00000455691 TTLL3Q9Y4R7 772 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms